(1)
OTHER.mut
(5)
PIWI.ip
(1)
PIWI.mut
(1)
TDRD1.ip
(27)
TESTES

Sense strand
AGCCGGAGCACACCAAATCCAGGATCACTGACTTTGAATTCAAGGAGCTGGTAGTGCTGCCCCGGGAGATCGACCTCAACGAGTGGCTGGCCAGCAACAGTGCGTGCGGGTGGGGAGATGGGTGCAGCAGCTGCAGGGCAGGGAGCCTTCCCCATCTCCAAGCACCCCCAGAGCAGTAGTCAATGGACAGGCTGAACTCAGGTGAACCCACTCCCTGTCACACCAGGTGGAGCAGGGGAGAGTACTCACAGGCCCTTTGCTTCTCTTCCAGCAACAACATTTTTTCACCACATCAACCTGCAGTATAGCACAATCTCAGAA


Size Perfect hit Total Norm Perfect Norm SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
...................................................................................................GTGCGTGCGGGTGGGGAGATGGGTGCAGCAGCTGCAGGGCAGGGAGCCTTCC.......................................................................................................................................................................... 52 1 41.00 41.00 41.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................TGACTTTGAATTCAAGGAGCTGGTAGT.......................................................................................................................................................................................................................................................................... 27 1 16.00 16.00 - 7.00 5.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
..................................TGAATTCAAGGAGCTGGTAGTGCTGC..................................................................................................................................................................................................................................................................... 26 1 10.00 10.00 - 3.00 2.00 - - - 1.00 - - - 1.00 - - 2.00 - - - - - - - - - 1.00 - - -
........................TCACTGACTTTGAATTCAAGGAGCTGG.............................................................................................................................................................................................................................................................................. 27 1 4.00 4.00 - 1.00 - 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - -
.........................CACTGACTTTGAATTCAAGGAGCTGG.............................................................................................................................................................................................................................................................................. 26 1 3.00 3.00 - 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGCAGTAGTCAATGGACAGG.................................................................................................................................. 20 1 3.00 3.00 - - - - - 3.00 - - - - - - - - - - - - - - - - - - - - -
........................TCACTGACTTTGAATTCAAGGAGCTGGT............................................................................................................................................................................................................................................................................. 28 1 3.00 3.00 - 1.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................TTTCACCACATCAACCTGCAGTATAGCAC.......... 29 1 2.00 2.00 - 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..................................TGAATTCAAGGAGCTGGTAGTGCTG...................................................................................................................................................................................................................................................................... 25 1 2.00 2.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - 1.00 -
............................TGACTTTGAATTCAAGGAGCTGGTAGTGCTt...................................................................................................................................................................................................................................................................... 31 t 2.00 1.00 - - - - - - - - - - - 1.00 1.00 - - - - - - - - - - - - - -
.....................GGATCACTGACTTTGAATTCAAGGAGC................................................................................................................................................................................................................................................................................. 27 1 2.00 2.00 - - - - - - 1.00 - - - - - - - - - - - 1.00 - - - - - - - -
...........................................................................................................................................AGGGAGCCTTCCCCAgacg................................................................................................................................................................... 19 gacg 2.00 0.00 - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - -
........................TCACTGACTTTGAATTCAAGGAGCTGc.............................................................................................................................................................................................................................................................................. 27 c 2.00 0.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................TGACTTTGAATTCAAGGAGCTGGTAG........................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
............................TGACTTTGAATTCAAGGAGCTGGTAGTG......................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................GACCTCAACGAGTGGCTGGCCAGC.................................................................................................................................................................................................................................. 24 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..........................................AGGAGCTGGTAGTGCTGCCCC.................................................................................................................................................................................................................................................................. 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...........................CTGACTTTGAATTCAAGGAGCTGGTAG........................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
............................TGACTTTGAATTCAAGGAGCTGGTA............................................................................................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................TTTTTTCACCACATCAACCTGCAGTATA.............. 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................AGATCGACCTCAACGAGTGGCTGGC...................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..............................................................CGGGAGATCGACCTCAACGAGTGGCT......................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................................AGATCGACCTCAACGAGTGGCTGGCCAGC.................................................................................................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...............................CTTTGAATTCAAGGAGCTGGTAGT.......................................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.........................CACTGACTTTGAATTCAAGGAGCTGGT............................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................TGAATTCAAGGAGCTGGTAGTGCTGt..................................................................................................................................................................................................................................................................... 26 t 1.00 2.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.........................................................................CCTCAACGAGTGGCTGGCCAGCAA................................................................................................................................................................................................................................ 24 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.............................GACTTTGAATTCAAGGAGCTGGTAG........................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
................................................................................................ACAGTGCGTGCGGGTGGGGA............................................................................................................................................................................................................. 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...CGGAGCACACCAAATCCAGGATCACTGA.................................................................................................................................................................................................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.............................GACTTTGAATTCAAGGAGCTGGTAGTGCTG...................................................................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
............................TGACTTTGAATTCAAGGAGCTGGTAGTGCTta..................................................................................................................................................................................................................................................................... 32 ta 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................GACTTTGAATTCAAGGAGCTGGTAGTG......................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
................................TTTGAATTCAAGGAGCTGGTAGTGC........................................................................................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.................................TTGAATTCAAGGAGCTGGTAGTGCTGt..................................................................................................................................................................................................................................................................... 27 t 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
............................TGACTTTGAATTCAAGGAGCTGGTAGTGCT....................................................................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
............................TGACTTTGAATTCAAGGAGCTGGTAGTGCTtt..................................................................................................................................................................................................................................................................... 32 tt 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................................................................AGGGAGCCTTCCCCATaca................................................................................................................................................................... 19 aca 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..................CCAGGATCACTGACTTTGAATTCAAGG.................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
................................TTTGAATTCAAGGAGCTGGTAGTGCT....................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..........................ACTGACTTTGAATTCAAGGAGCTGGT............................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................CAGGTGAACCCACTgg........................................................................................................... 16 gg 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
............................TGACTTTGAATTCAAGGAGCTGGTAGaa......................................................................................................................................................................................................................................................................... 28 aa 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................GACTTTGAATTCAAGG.................................................................................................................................................................................................................................................................................... 16 3 0.33 0.33 - - - - - - - - - - - - - - - - - - - - - - - - - - 0.33

Antisense strand
AGCCGGAGCACACCAAATCCAGGATCACTGACTTTGAATTCAAGGAGCTGGTAGTGCTGCCCCGGGAGATCGACCTCAACGAGTGGCTGGCCAGCAACAGTGCGTGCGGGTGGGGAGATGGGTGCAGCAGCTGCAGGGCAGGGAGCCTTCCCCATCTCCAAGCACCCCCAGAGCAGTAGTCAATGGACAGGCTGAACTCAGGTGAACCCACTCCCTGTCACACCAGGTGGAGCAGGGGAGAGTACTCACAGGCCCTTTGCTTCTCTTCCAGCAACAACATTTTTTCACCACATCAACCTGCAGTATAGCACAATCTCAGAA


Size Perfect hit Total Norm Perfect Norm SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
.......................................................................................................................................................................................................................................................................................TTTCACCACATCAAttt......................... 17 ttt 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -