| Gene: Fank1 | ID: uc009kdn.1_intron_3_0_chr7_141059883_f.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) PIWI.ip |
(12) TESTES |
| GCTGTCAGTGTGAACGATGAAGATCTCCTGCTTCGAATTTTGGAAGGAGGGTGAGAGAGCGCAGCCAGCTTTTCTGTCTTTCTTCCAGTGCCCACTAGGTACACAGACGATACCCAGCACAGTGCCCACTAGGTACACAGACGATACACAGTACAGCTTTATTTTGTTTTTCCTAAATAAATTCTCCAGTACCTTCAAAAGCACCTCCTACTTTACCTCAGGTGCCCGATATGCAGTAGTGAAGTCTAGT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGAGAGCGCAGCCAGCTTTTCTGTCTTTCTTCCAGTGCCCACTAGGTAC.................................................................................................................................................... | 52 | 1 | 62.00 | 62.00 | 62.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............AACGATGAAGATCTCCTGCTTCGAATTTTG................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............AACGATGAAGATCTCCTGCTTCGAATTTT................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......AGTGTGAACGATGAAGATCTCCTGCTT......................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..TGTCAGTGTGAACGATGAAGATCT................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............AACGATGAAGATCTCCTGCTTCGAATT................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...GTCAGTGTGAACGATGAAGATCTCCTGCT.......................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..TGTCAGTGTGAACGATGAAGATCTCCTGCT.......................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| GCTGTCAGTGTGAACGATGAAGATCTCCTGCTTCGAATTTTGGAAGGAGGGTGAGAGAGCGCAGCCAGCTTTTCTGTCTTTCTTCCAGTGCCCACTAGGTACACAGACGATACCCAGCACAGTGCCCACTAGGTACACAGACGATACACAGTACAGCTTTATTTTGTTTTTCCTAAATAAATTCTCCAGTACCTTCAAAAGCACCTCCTACTTTACCTCAGGTGCCCGATATGCAGTAGTGAAGTCTAGT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................CCTAAATAAATTCTCCAGTACCTTCA..................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................CAGACGATACACAgtaa.................................................................................................... | 17 | gtaa | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................GCTTTTCTGTCTTTCTTCCAGTGCCCA............................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TTTTCTGTCTTTCTTCCAGTGCCCACT.......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................GTCTTTCTTCCAGTGCCC............................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................................................................................................................TTCCTAAATAAATTCTCCAGTACCTT....................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |