(4)
OTHER.mut
(5)
PIWI.ip
(2)
PIWI.mut
(1)
TDRD1.ip
(25)
TESTES

Sense strand
GCCCAACAGTCGTGGCTGTCTCCTTCAATCTCAACTCTCAGGAGTCTGAGGTAGGAAAATTCATAAGTGTGAAACTAGTTTGGGCGACTGAGGGAATCCCAGAGCAGCTTGAACTTTACAGTGAGCTGAGACCATATCTCAAAAGCAAATAGTTCTGGTTCGTTGTTACAAAAACAAACACACACCTCATAGATTTTTGTTAGGTTGTCAGAATGATAGAGTGCACAGTCTGAAGATCAATAAGATCCATTATATATAACCTAAAAAACAAAATCAGTCTGTCTAGGCTCCAGATTTTATTTTCCTTATTTCTCTCAGGCTCTAGAGATGACTTAAACCTGGGGGAACATTTCTAGGAGTTTGTGCATAGCGAGGCTTTCTGAACCTCCAGACCTAAGAGAGAGCGGGTCCCTTGGCATGGATGTTTGGGGAACCTCTTTGCGACTTGCTTTAGTAACCAAGAAACAAAACTGACTCGATCCTTCCTTCTGACTACTGTCCCCCCTTTCTAGGCCTCAGCCCTTCTGCAGAGAGAATGCTGCTGCCACCTGTCTGTCCCTCC
..................................................................................................................................................................................................................................................................................................................................................................................................................................((((.....((((....((((....(((......)))....))))...........................(((....))).))))..))))...................................................
............................................................................................................................................................................................................................................................................................................................................................................................................................413................................................................................................512................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR037902(GSM510438)
testes_rep3. (testes)
.............................................................................................................................................................................................TAGATTTTTGTTAGGTTGTCAGAATG........................................................................................................................................................................................................................................................................................................................................................... 26 1 15.00 15.00 4.00 1.00 2.00 1.00 1.00 2.00 - 1.00 - 3.00 - - - - - - - - - - - - - - -
.............................................................................................................................................................................................TAGATTTTTGTTAGGTTGTCAGAAT............................................................................................................................................................................................................................................................................................................................................................ 25 1 7.00 7.00 - 1.00 - - - - 4.00 - - - - - - - - 1.00 - - - - - - 1.00 - -
.....................................................................................................................................................................................................TGTTAGGTTGTCAGAATGATAGAGTGC.................................................................................................................................................................................................................................................................................................................................................. 27 1 6.00 6.00 2.00 2.00 - - - - - - - - - - 1.00 - - - - - - - - 1.00 - - -
.............................................................................................................TGAACTTTACAGTGAGCTGAGACCATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 5.00 5.00 - 1.00 - - - 1.00 - 2.00 - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................TGAACTTTACAGTGAGCTGAGACCATATC........................................................................................................................................................................................................................................................................................................................................................................................................................................ 29 1 4.00 4.00 2.00 - - - - 1.00 - - - - - - - - - - - - 1.00 - - - - - -
.....................................................................................................................................................................................................................TGATAGAGTGCACAGTCTGAAGATCA................................................................................................................................................................................................................................................................................................................................... 26 1 3.00 3.00 - - 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAGAGAATGCTGCTGCCACCTG........... 26 1 2.00 2.00 - - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGTTTGGGGAACCTCTTTGCGACTT................................................................................................................... 29 1 2.00 2.00 - - - - - - - - - - - - - 2.00 - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGAGAGCGGGTCCCTTGGCAT............................................................................................................................................... 25 1 2.00 2.00 - - - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................TAGATTTTTGTTAGGTTGTCAGAATGA.......................................................................................................................................................................................................................................................................................................................................................... 27 1 2.00 2.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................TAGGTTGTCAGAATGATAGAGTGCAC................................................................................................................................................................................................................................................................................................................................................ 26 1 2.00 2.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - -
..............................................................................................................................................................................................................................................................................................................................................................TTCTAGGAGTTTGTGCATAGCGAGGC.......................................................................................................................................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................TAGATTTTTGTTAGGTTGTCAGAATGATA........................................................................................................................................................................................................................................................................................................................................................ 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................TAACCTAAAAAACAAAATCAGTCTGTCT...................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTGCCACCTGTCTGTCCCTCa 26 a 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................TTGAACTTTACAGTGAGCTGAGACCATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................TTGTTAGGTTGTCAGAATGATAGAGTGC.................................................................................................................................................................................................................................................................................................................................................. 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................TGTCAGAATGATAGAGTGCACAGTCTGAA........................................................................................................................................................................................................................................................................................................................................ 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.....................................................................................................................................................................................................................................................................................................ATTTTATTTTCCTTATTTCTCTCAGGC.................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................CGAGGCTTTCTGAACCTCCAGA.......................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................AGAGAGAGCGGGTCCCTTGGCATGGAT........................................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................TAGTTTGGGCGACTGAGGGAATCCCAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TGTTAGGTTGTCAGAATGATAGAGTG................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTACTGTCCCCCCTTTCTAGGCCTC............................................. 28 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................TTCTGAACCTCCAGAagca...................................................................................................................................................................... 19 agca 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTAACCAAGAAACAAAACTGACTCGATCC................................................................................ 31 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................TTTCTGAACCTCCAGACCTAAGAGAGAGC............................................................................................................................................................. 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................GAGTTTGTGCATAGCGAGGCTTTCT..................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAACAAAACTGACTCGATCCTTCCT........................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................GATGACTTAAACCTGG............................................................................................................................................................................................................................ 16 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................TAGATTTTTGTTAGGTTGTCAGAA............................................................................................................................................................................................................................................................................................................................................................. 24 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................TAAGTGTGAAACTAGTTTGGGCGACTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................TTCAATCTCAACTCTCAGGAGTCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...............................................................................................................AACTTTACAGTGAGCTGAGACCATATC........................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGGGGAACCTCTTTGCGACTTGC................................................................................................................. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................TAAGTGTGAAACTAGTTTGGGCGACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............................................................TAAGTGTGAAACTAGTTTGGGCGACTGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 30 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTCCCCCCTTTCTAGGCCTCAGCCtttt..................................... 31 tttt 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGACTTGCTTTAGTAACCAAGAAAC................................................................................................ 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................................GTGAAACTAGTTTGGGCGACTGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................TCATAGATTTTTGTTAGGTTGTCAGAAT............................................................................................................................................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..............................................TGAGGTAGGAAAATTCATAAGTGTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAAAACTGACTCGATCCTTCCTT.......................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................AAGCAAATAGTTCTGGTTCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGAGAATGCTGCTGCCACCTGTC......... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCAGAGAGAATGCTGCTGCCACCT............ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................TGAACCTCCAGACCTAAGAGAGAGCGG........................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................TAGAGATGACTTAAACCTGGGGGA........................................................................................................................................................................................................................ 24 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTGCCACCTGTCTGTCCCTC. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAATGCTGCTGCCACCTGTCT........ 24 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
....................................................................................................................................................................................................TTGTTAGGTTGTCAGAATGATAGAGTGCAt................................................................................................................................................................................................................................................................................................................................................ 30 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................TAGATTTTTGTTAGGTTGTCAGAATGAT......................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - -

Antisense strand
GCCCAACAGTCGTGGCTGTCTCCTTCAATCTCAACTCTCAGGAGTCTGAGGTAGGAAAATTCATAAGTGTGAAACTAGTTTGGGCGACTGAGGGAATCCCAGAGCAGCTTGAACTTTACAGTGAGCTGAGACCATATCTCAAAAGCAAATAGTTCTGGTTCGTTGTTACAAAAACAAACACACACCTCATAGATTTTTGTTAGGTTGTCAGAATGATAGAGTGCACAGTCTGAAGATCAATAAGATCCATTATATATAACCTAAAAAACAAAATCAGTCTGTCTAGGCTCCAGATTTTATTTTCCTTATTTCTCTCAGGCTCTAGAGATGACTTAAACCTGGGGGAACATTTCTAGGAGTTTGTGCATAGCGAGGCTTTCTGAACCTCCAGACCTAAGAGAGAGCGGGTCCCTTGGCATGGATGTTTGGGGAACCTCTTTGCGACTTGCTTTAGTAACCAAGAAACAAAACTGACTCGATCCTTCCTTCTGACTACTGTCCCCCCTTTCTAGGCCTCAGCCCTTCTGCAGAGAGAATGCTGCTGCCACCTGTCTGTCCCTCC
..................................................................................................................................................................................................................................................................................................................................................................................................................................((((.....((((....((((....(((......)))....))))...........................(((....))).))))..))))...................................................
............................................................................................................................................................................................................................................................................................................................................................................................................................413................................................................................................512................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR037902(GSM510438)
testes_rep3. (testes)
..................................................................................ACTGAGGGAATCCaacg............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 17 aacg 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................AAATAGTTCTGGTTtgaa.................................................................................................................................................................................................................................................................................................................................................................................................................. 18 tgaa 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGACTTGCTTTAGTAAg......................................................................................................... 20 g 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00
................................................................................................................TTACAGTGAGCTGAcct................................................................................................................................................................................................................................................................................................................................................................................................................................................. 17 cct 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -