| Gene: Setd1a | ID: uc009jwt.1_intron_15_0_chr7_134940952_f | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(16) TESTES |
| GCACCTCAGCCATCATGGACAGTGATCTGCTAAAGCTAAACCAGCTCAAGGTCAGGAGGGGAAACTGGAAGAGGGAGGAGACCCAGTGAAAAAAACTACAGCAAGGAGAGTTGCCCCTGGTGGGATCCTGTGGAACAGAGAGGGCTGAAGGGAAGGGACGGGAAGGTACAAGTTTGTGGGAGCATCCAGCAGTTAAAGCTATCTTGTGTCCCCTAGTTTCGGAAGAAGAAACTCCGATTTGGCCGGAGCCGTATCCATGAGTGGGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTCAGGAGGGGAAACTGGAAGAGGGAGGAGACCCAGTGAAAAAAACTACAGC.................................................................................................................................................................... | 52 | 1 | 165.00 | 165.00 | 165.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TCGGAAGAAGAAACTCCGATTTGGCCG..................... | 27 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GGGATCCTGTGGAACAGAGAGGGCTGAAGGG.................................................................................................................. | 31 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................GAAGAAACTCCGAgcaa......................... | 17 | gcaa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................AGAAGAAACTCCGATTTGGCCGGA................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............CATGGACAGTGATCTGC............................................................................................................................................................................................................................................ | 17 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................................................AGAAGAAACTCCGATTTGGCCGGAGCC................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................GGGAAACTGGAAGAGGat.............................................................................................................................................................................................. | 18 | at | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................................................................................................CGGAAGAAGAAACTCCGATTTGGCCGGA................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TCGGAAGAAGAAACTCCGATTTGGCCGGAGC................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................AAGGGAAGGGACGGGAAGtga.................................................................................................. | 21 | tga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............TGGACAGTGATCTGCTAAAGCTAAACCAGC............................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................AAACTGGAAGAGGGAGGAGACCCAGTG.................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TCGGAAGAAGAAACTCCGATTTGGCCGG.................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................TCCTGTGGAACAGAGAGG........................................................................................................................... | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| GCACCTCAGCCATCATGGACAGTGATCTGCTAAAGCTAAACCAGCTCAAGGTCAGGAGGGGAAACTGGAAGAGGGAGGAGACCCAGTGAAAAAAACTACAGCAAGGAGAGTTGCCCCTGGTGGGATCCTGTGGAACAGAGAGGGCTGAAGGGAAGGGACGGGAAGGTACAAGTTTGTGGGAGCATCCAGCAGTTAAAGCTATCTTGTGTCCCCTAGTTTCGGAAGAAGAAACTCCGATTTGGCCGGAGCCGTATCCATGAGTGGGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................................GAGCCGTATCCATtga........ | 16 | tga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |