(6)
OTHER.mut
(1)
OVARY
(3)
PIWI.ip
(22)
TESTES

Sense strand
CGGTGCCCAGGAGCCAGAGGTGGCCATGTGCAGGACAGAAGTCCACTCAGGTGAAGGACTGGGTACTTGCCTGGGGAAACTTCTGTGTTGCCAGCCTGTGTGGTGTCTTCTAGTGACTGCACTTACTGCCTGGCAGTTTCTTCCCTGTTTTTCTGTTTCTTGGCCAAAGCCATGATGGCTGGCCCCTGGATTCATCTGAAAAGGGTTCTGTCCAGTGCTCTCACCTCATATCTACAGGGTCACTAGGCTGTATAGGTTGTAGCCCCTCGTTCCCACTCCTCTGCTGCCATCTCTGTGACTGCGTTCTGGAGTCTCCTTCAGTTCTTGCTGTCCACCTCTGACAAGTGCTTAGCTCACTGCACTTGGGAATGGGGACCACACAGACACCTTTCTTTATGCTGCATCTGGACATCTGTGCACCACGCATGCTCAGATGCTGTGGCCTCTCCCCTCCTGTGCCCTGTTTCCATGTGGGGCTGTGGGAATCGAGGGGCAGTAGAGTCAGAGTCTGAGCTTTGTCATGGTCTCCCAGCAGATTGCAGGCACGAGAAGGAAGGGAAGAGACCAAGGGAAGAGACCAAGGCA


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
...........................................................................................................TTCTAGTGACTGCACTTACTGCCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 4 5.50 5.50 - 3.50 1.50 0.25 - - 0.25 - - - - - - - - - - - - - - - -
..............................................................................................................TAGTGACTGCACTTACTGCCTGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 25 4 2.25 2.25 - - - 1.00 0.50 - - - - - - - - - - - - 0.50 - - - - 0.25
.............................................................................................................................................................................................................TTCTGTCCAGTGCTCTgaa......................................................................................................................................................................................................................................................................................................................................................................... 19 gaa 2.00 0.00 - - - - - - - 2.00 - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................TTAGCTCACTGCAacct............................................................................................................................................................................................................................ 17 acct 2.00 0.00 - - - - - - - - - - - 2.00 - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................TTTATGCTGCATCTGGACATCTGTGC....................................................................................................................................................................... 26 2 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................TTAGCTCACTGCACTTGGGAATGGGG................................................................................................................................................................................................................... 26 1 2.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - -
...................................................TGAAGGACTGGGTACTTGCCTGGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 26 3 1.67 1.67 1.67 - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCTGCATCTGGACATCTGTGC....................................................................................................................................................................... 28 2 1.50 1.50 - 1.00 - 0.50 - - - - - - - - - - - - - - - - - - -
...........................................................................................................TTCTAGTGACTGCACTTACTGCCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 4 1.25 1.25 - - - - - - - - - - - - - 1.25 - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGGCTGTGGGAATCGAGGGGCA.......................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCTGCATCTGGACATCTGT......................................................................................................................................................................... 26 2 1.00 1.00 - - - - - 0.50 0.50 - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTTATGCTGCATagt.................................................................................................................................................................................. 19 agt 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGGCTGTGGGAATCGAGGGG............................................................................................ 23 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTGTCATGGTCTCCCAGCAG.................................................. 27 2 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - -
..............................................................................................................TAGTGACTGCACTTACTGCCTGGCAGgtt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 29 gtt 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGAGAAGGAAGGGAAGAGACCA.................. 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................TGCTGTCCACCTCTGACAAGTGCTTAGC........................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................TGCATCTGGACATCTGTGCACCACGC................................................................................................................................................................ 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCCATGTGGGGCTGTGGGAATa.................................................................................................. 26 a 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................TGGATTCATCTGAAAAGGGTTCTGTCC.................................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................TGCTGCCATCTCTGTGACTGCGTTCT...................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................ATTCATCTGAAAAGGGTTCTGTCCAGT................................................................................................................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................AAGTCCACTCAGGTGAAGGACTGGGTAaa...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 29 aa 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................TACAGGGTCACTAGGCTGTATAGGTTG...................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAGGGAAGAGACCAAGGGAAGA.......... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGAATCGAGGGGCAGTAGAG.................................................................................... 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
..................................................................TTGCCTGGGGAAACTTCTGTGTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 3 1.00 1.00 0.67 - - - - - - - - - - - - - - - - - - 0.33 - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAGAGTCAGAGTCTGAGCTTTGTCA................................................................ 32 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
..............................................................................................................TAGTGACTGCACTTACTGCCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 4 0.75 0.75 - - 0.50 - - - 0.25 - - - - - - - - - - - - - - - -
............................TGCAGGACAGAAGTCCACTCAGGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 3 0.67 0.67 - - - - - 0.33 - - - - - - 0.33 - - - - - - - - - -
..................................................................TTGCCTGGGGAAACTTCTGTGTTGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 3 0.67 0.67 - - - - - 0.67 - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCTGAGCTTTGTCATGGTCTCCCAGCAG.................................................. 31 2 0.50 0.50 - - - - - - - - 0.50 - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATGGTCTCCCAGCAGATTGCAGG.......................................... 27 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................TGTATAGGTTGTAGCCCCTCGTTCCCA...................................................................................................................................................................................................................................................................................................................... 27 2 0.50 0.50 - - - - - - - 0.50 - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................GCTGCATCTGGACATCTGT......................................................................................................................................................................... 19 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGCAGATTGCAGGCACGAGAAG................................. 26 4 0.50 0.50 - - - - - 0.25 - - - - - - 0.25 - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................TGACTGCGTTCTGGAGTCTCCTTCAGTT...................................................................................................................................................................................................................................................................... 28 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - -
.................................................GGTGAAGGACTGGGTACTTGCCTGGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 27 3 0.33 0.33 - - - - - - 0.33 - - - - - - - - - - - - - - - -
...................................................................TGCCTGGGGAAACTTCTGTGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 24 3 0.33 0.33 - - - - - - - - - - - - - - - - - - 0.33 - - - -
..................................................................TTGCCTGGGGAAACTTCTGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 21 3 0.33 0.33 - - - - - - - - - - - - - - - - - - - - 0.33 - -
..................................................................TTGCCTGGGGAAACTTCTGTGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 25 3 0.33 0.33 - - - - - - - - - 0.33 - - - - - - - - - - - - -
...................................................................TGCCTGGGGAAACTTCTGTGTTGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 3 0.33 0.33 - - - - - - 0.33 - - - - - - - - - - - - - - - -
..........................TGTGCAGGACAGAAGTCCACTCAGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 3 0.33 0.33 - - - - - 0.33 - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGCAGATTGCAGGCACGAGAAGG................................ 27 4 0.25 0.25 - - - - - - - - - - 0.25 - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCTCCCAGCAGATTGCAGGCAC....................................... 26 4 0.25 0.25 - - 0.25 - - - - - - - - - - - - - - - - - - - -
............................................................................................................TCTAGTGACTGCACTTACTGCCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 4 0.25 0.25 - - - - - - - 0.25 - - - - - - - - - - - - - - -
..............................................................................................................TAGTGACTGCACTTACTGCCTGGCAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 4 0.25 0.25 - - - - - - 0.25 - - - - - - - - - - - - - - - -
...........................................................................................................TTCTAGTGACTGCACTTACTGCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 4 0.25 0.25 - - - - 0.25 - - - - - - - - - - - - - - - - - -
..............................................................................................................TAGTGACTGCACTTACTGCCTGGCAGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 29 4 0.25 0.25 - - - - - - - - - - - - - - - - - - - - - 0.25 -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGTCTCCCAGCAGA................................................. 18 6 0.17 0.17 - - - - - 0.17 - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TCTGTCCAGTGCTCTC........................................................................................................................................................................................................................................................................................................................................................................... 16 8 0.12 0.12 - - 0.12 - - - - - - - - - - - - - - - - - - - -

Antisense strand
CGGTGCCCAGGAGCCAGAGGTGGCCATGTGCAGGACAGAAGTCCACTCAGGTGAAGGACTGGGTACTTGCCTGGGGAAACTTCTGTGTTGCCAGCCTGTGTGGTGTCTTCTAGTGACTGCACTTACTGCCTGGCAGTTTCTTCCCTGTTTTTCTGTTTCTTGGCCAAAGCCATGATGGCTGGCCCCTGGATTCATCTGAAAAGGGTTCTGTCCAGTGCTCTCACCTCATATCTACAGGGTCACTAGGCTGTATAGGTTGTAGCCCCTCGTTCCCACTCCTCTGCTGCCATCTCTGTGACTGCGTTCTGGAGTCTCCTTCAGTTCTTGCTGTCCACCTCTGACAAGTGCTTAGCTCACTGCACTTGGGAATGGGGACCACACAGACACCTTTCTTTATGCTGCATCTGGACATCTGTGCACCACGCATGCTCAGATGCTGTGGCCTCTCCCCTCCTGTGCCCTGTTTCCATGTGGGGCTGTGGGAATCGAGGGGCAGTAGAGTCAGAGTCTGAGCTTTGTCATGGTCTCCCAGCAGATTGCAGGCACGAGAAGGAAGGGAAGAGACCAAGGGAAGAGACCAAGGCA


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
..........................................................................................................................................TCTTCCCTGTTTTTCTGTTTCTTGGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 7.00 7.00 7.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................ACTGCCTGGCAGTTTCTTCCCTGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 2 1.50 1.50 - - - 1.50 - - - - - - - - - - - - - - - - - - -
..............................................................................CTGTGTTGCCAGCCTGTGTGGTGTCcagt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 29 cagt 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - - - - -
.........................................................................................................................................TTCTTCCCTGTTTTTCTGTTTCTTGGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................GGTTCTGTCCAGTGCTCTCACCTCATA................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TGTCCAGTGCTCTCACCTCATATCTAC.............................................................................................................................................................................................................................................................................................................................................................. 27 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................TCTGGAGTCTCCTTCAGTTCTTGCTGTCCA........................................................................................................................................................................................................................................................... 30 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................GGAGTCTCCTTCAGTTCTTGCTGTCCAC.......................................................................................................................................................................................................................................................... 28 2 0.50 0.50 - - - 0.50 - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................CCAGTGCTCTCACCTCATATCTACA............................................................................................................................................................................................................................................................................................................................................................. 25 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................TCAGTTCTTGCTGTCCACCTCTGACA.................................................................................................................................................................................................................................................. 26 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - -