| Gene: Mapk3 | ID: uc009jsm.1_intron_5_0_chr7_133907880_f | SPECIES: mm9 |
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(2) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(15) TESTES |
| GAAAACCAAGGTGGCTTGGGCCAAGCTCTTTCCTAAATCTGACTCCAAAGGTGAGTGAAGCAGAGGATCCGGGGTAGGCTAAAACCCAGCGGCAAAGAAGAGTGTGTGACCCTAACGCCTGCCTCAGTAGATAGCCACCCCCCCCAGGCACTGGACAAGGGATGTCCATGGGATTCCTTTAGCCTTCCTCCTGACTGCTGCCCCCTGCCTTGCCTTAGCTCTTGACCTGCTGGACCGGATGTTAACCTTCAACCCAAACAAGCGCATC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGTGAAGCAGAGGATCCGGGGTAGGCTAAAACCCAGCGGCAAAGAAGAG...................................................................................................................................................................... | 52 | 1 | 24.00 | 24.00 | 24.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TCTTGACCTGCTGGACCGGATGTTAACC..................... | 28 | 1 | 5.00 | 5.00 | - | 4.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CTTAGCTCTTGACCTGCTGGA.................................. | 21 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TCCTAAATCTGACTCCAAAGc......................................................................................................................................................................................................................... | 21 | c | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................AGCTCTTGACCTGCTGGACCGGATGT.......................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................TCTTGACCTGCTGGACCGGATGTTA........................ | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGACCTGCTGGACCGGATGTTAAC...................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................GACCTGCTGGACCGGATGTTtacc..................... | 24 | tacc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................CAAGCTCTTTCCTAAATCTGACTCCAAAG.......................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................................TTGACCTGCTGGACCGGATGgtat....................... | 24 | gtat | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................AAAACCCAGCGGCAAAGAAGAGTGTGT................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TCTTGACCTGCTGGACCGGATGTTAAC...................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...AACCAAGGTGGCTTGGGCCAAGCT................................................................................................................................................................................................................................................. | 24 | 2 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGACCTGCTGGACCGGATGTTAACCTT................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................TGGACCGGATGTTAACCTTCAACCCA............ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .AAAACCAAGGTGGCTTGGGCCAA.................................................................................................................................................................................................................................................... | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| GAAAACCAAGGTGGCTTGGGCCAAGCTCTTTCCTAAATCTGACTCCAAAGGTGAGTGAAGCAGAGGATCCGGGGTAGGCTAAAACCCAGCGGCAAAGAAGAGTGTGTGACCCTAACGCCTGCCTCAGTAGATAGCCACCCCCCCCAGGCACTGGACAAGGGATGTCCATGGGATTCCTTTAGCCTTCCTCCTGACTGCTGCCCCCTGCCTTGCCTTAGCTCTTGACCTGCTGGACCGGATGTTAACCTTCAACCCAAACAAGCGCATC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................GATTCCTTTAGCCTTtct.................................................................................. | 18 | tct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................CTAACGCCTGCCTCAGTAGATAGCCA................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |