| Gene: Atxn2l | ID: uc009jrr.1_intron_7_0_chr7_133638238_r | SPECIES: mm9 |
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(2) OTHER.mut |
(14) TESTES |
| TGAACCCCAACGCCAAGGAGTTCAATCCAACAAAACCTCTGCTGTCTGTGGTAAGCTGGGACTATTTCTTGTAGACTTGGGTCTCCTTGAGGGGACAGTAGAGCAGTACTCCAGGAGAGGACTTGACTGTCAGGATAGCGTGCTGTCCCATAGTGTGAGATGGCACTGTCAGTCTGGGCAGGAGCAGTTAGTTGGACTGCTTTGGGAAAAACAGTGACATCTCCAGGGCTGAGTGATGAAGGCTGCTTATTGATTCTGACAAGTTACTTTAGGTCTTACTATTTGGTGTGTTGGGTGTGTGAGGGTTAGGATTATGAGCTCCAAGGAATCAGCTGACGTGGCTTTAACTGATGTACTCATGGGGCTTCGAGATTTCACACAACCACTTAGAGCTCTCTTAGTTTGTGAATGTCCATCTTGTGATTTGCTATGAAGCGCTTAGGGAAAGTGTAGGATATATTTGACACAGGTGGATTTAAAAAGGCTGAAGTGGGATTACAGAAATATCTCCTCTTGTCTCTTACAGAACAAATCTACCAGTACTCCAACTTCACCAGGGCCCCGTACTCATTCAAC ..................................................................................................................................................................................................................................................................................................................................................................................................................................................((((((.....))))))...........((.(((((.(((..((......(((((......)).)))...))..))).))))).))........................................................ ..........................................................................................................................................................................................................................................................................................................................................................................................................................................427................................................................................................526................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGCTGGGACTATTTCTTGTAGACTTGGGTCTCCTTGAGGGGACAGTAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 52 | 1 | 119.00 | 119.00 | 119.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................CTGAGTGATGAAGGCTGCTTATTGATTCTGACA........................................................................................................................................................................................................................................................................................................................... | 33 | 1 | 25.00 | 25.00 | - | 13.00 | 5.00 | - | 2.00 | 1.00 | 2.00 | - | - | 2.00 | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................AGGATTATGAGCTCCAAGGAATCAGC................................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTATGAAGCGCTTAGGGAAAGTGTAGGATA....................................................................................................................... | 32 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - |
| .....................................................................................................................................................................................................................................TGAGTGATGAAGGCctt.......................................................................................................................................................................................................................................................................................................................................... | 17 | ctt | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| .......................................................................................................................GACTTGACTGTCAGGATAGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................................................................................................................................GGTTAGGATTATGAGCTCCAAGGAATCAGCTG................................................................................................................................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................CTGAGTGATGAAGGCTGCTTATTGATTCTGAC............................................................................................................................................................................................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGCTGGGACTATTTCTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGGGATTACAGAtat....................................................................... | 19 | tat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................AGTCTGGGCAGGAGCAGTTAGTTGGACTGC........................................................................................................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGATTACAGAAAaaa..................................................................... | 17 | aaa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................GTAGACTTGGGTCTCCTTGAGGGGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................TTGAGGGGACAGTAGAGCAGTACTCCAGGAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 34 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGAAGCGCTTAGGGAAAGTGTAGGATATA..................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................AAACCTCTGCTGTCTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| TGAACCCCAACGCCAAGGAGTTCAATCCAACAAAACCTCTGCTGTCTGTGGTAAGCTGGGACTATTTCTTGTAGACTTGGGTCTCCTTGAGGGGACAGTAGAGCAGTACTCCAGGAGAGGACTTGACTGTCAGGATAGCGTGCTGTCCCATAGTGTGAGATGGCACTGTCAGTCTGGGCAGGAGCAGTTAGTTGGACTGCTTTGGGAAAAACAGTGACATCTCCAGGGCTGAGTGATGAAGGCTGCTTATTGATTCTGACAAGTTACTTTAGGTCTTACTATTTGGTGTGTTGGGTGTGTGAGGGTTAGGATTATGAGCTCCAAGGAATCAGCTGACGTGGCTTTAACTGATGTACTCATGGGGCTTCGAGATTTCACACAACCACTTAGAGCTCTCTTAGTTTGTGAATGTCCATCTTGTGATTTGCTATGAAGCGCTTAGGGAAAGTGTAGGATATATTTGACACAGGTGGATTTAAAAAGGCTGAAGTGGGATTACAGAAATATCTCCTCTTGTCTCTTACAGAACAAATCTACCAGTACTCCAACTTCACCAGGGCCCCGTACTCATTCAAC ..................................................................................................................................................................................................................................................................................................................................................................................................................................................((((((.....))))))...........((.(((((.(((..((......(((((......)).)))...))..))).))))).))........................................................ ..........................................................................................................................................................................................................................................................................................................................................................................................................................................427................................................................................................526................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
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| ..........................................................................................................................................................................................................................CTCCAGGGCTGAGTGAtt.................................................................................................................................................................................................................................................................................................................................................... | 18 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................................................AAAACAGTGACATCTCC................................................................................................................................................................................................................................................................................................................................................................ | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |