| Gene: Atxn2l | ID: uc009jrr.1_intron_6_0_chr7_133638007_r | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| CCCAGTACATCTCATATATACCTCAGATCCACATGGGACCAGCTGTACAGGTAGGAGAGAGTGAGCCCAAGAAAAGTGCTGATTGTCCAGCTCAGGCTGTTCTGAGCACCTGCTGAGCCCCAGATCTTTCTCAGGCGCCTCAGATGTATCCATATCCTGTATCCAATTCCGTGCCTGGGCAGCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................CCAAGAAAAGTGCTGATTGTCCAGCTCAGGCTGTTCTGAGCACCTGCTGAGC.................................................................. | 52 | 1 | 54.00 | 54.00 | 54.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGGAGAGAGTGAGCCCAAGAAAAGTGt......................................................................................................... | 29 | t | 3.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - |
| ................................ATGGGACCAGCTGTACAGGcgcc................................................................................................................................. | 23 | cgcc | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......ACATCTCATATATACCTCAGATCCACAT...................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................CATGGGACCAGCTGTACAGGcg................................................................................................................................... | 22 | cg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................AGATGTATCCATATCCTGTA....................... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TATATACCTCAGATCCACATGGGA.................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TGTATCCAATTCCGTGCCTGGGCAGCA | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGGAGAGAGTGAGCCCAAGAAAA............................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........TCATATATACCTCAGATCCACATGG.................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................GTAGGAGAGAGTGAGCCCAAGA................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............TATATACCTCAGATCCACATGGGACCA............................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................CATGGGACCAGCTGTACAGGcgcc................................................................................................................................. | 24 | cgcc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TATATACCTCAGATCCACATGGGAac................................................................................................................................................ | 26 | ac | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TCAGATGTATCCATATCCTGTATCCAAT................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............TATATACCTCAGATCCACATGGGACCAG.............................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................GTAGGAGAGAGTGAGCCCAAGAAAAG............................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................GGGACCAGCTGTACAGGcgcc................................................................................................................................. | 21 | cgcc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TATCCATATCCTGTATCCAATTCCGTGC.......... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACCTCAGATCCACATGGGACCAGCTGc.......................................................................................................................................... | 28 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................AGGCTGTTCTGAGCAC........................................................................... | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |
| CCCAGTACATCTCATATATACCTCAGATCCACATGGGACCAGCTGTACAGGTAGGAGAGAGTGAGCCCAAGAAAAGTGCTGATTGTCCAGCTCAGGCTGTTCTGAGCACCTGCTGAGCCCCAGATCTTTCTCAGGCGCCTCAGATGTATCCATATCCTGTATCCAATTCCGTGCCTGGGCAGCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................CCCAGATCTTTCTCAGcagt.................................................. | 20 | cagt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................CTCAGGCGCCTCAGATGTATCCATA.............................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |