| Gene: 4930408O21Rik | ID: uc009jmt.1_intron_2_0_chr7_127812074_r.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(11) TESTES |
| GAGAGCCCTGCTCTGAGCAATGGAAAAGGGCTCTCTCAAAAGCAAAAATGGTAAACGGGGAAACAGGACGAGGGTGATGCCTTGGGTTCCAAGCCTTCCTAGATTTGCCTTTCCTGTAAAATGGGCAGTCAGCCACACGTCGGAGTCTCTCACCATTGTTTGTTGGAGATATAACTTTGCATGCAGTGCGATGTTCTTTTTTAGTGGACAGCTCTATGAGTTTCCACAAGTATGTAATACTCTTGACCAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................GTCAGCCACACGTCGGAGTCTCTCACCATTGTTTGTTGGAGATATAACTTTG....................................................................... | 52 | 1 | 88.00 | 88.00 | 88.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TGTTTGTTGGAGATATAACTTTGCATGC.................................................................. | 28 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TCTTTTTTAGTGGACAGCTCTATGA............................... | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ........TGCTCTGAGCAATGGAAAAGGGCTCT........................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............TGAGCAATGGAAAAGGGCTCTCTCAAAAGC............................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................ACGGGGAAACAGGACtttt................................................................................................................................................................................. | 19 | tttt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................TGTTGGAGATATAACTTTGCATGCA................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................TTTTAGTGGACAGCTCTcgtc............................... | 21 | cgtc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................AAACGGGGAAACAGGcaat................................................................................................................................................................................... | 19 | caat | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....GCCCTGCTCTGAGCAATGGAAAAGG............................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............AGCAATGGAAAAGGGCTCTCTCAAAAGC............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| GAGAGCCCTGCTCTGAGCAATGGAAAAGGGCTCTCTCAAAAGCAAAAATGGTAAACGGGGAAACAGGACGAGGGTGATGCCTTGGGTTCCAAGCCTTCCTAGATTTGCCTTTCCTGTAAAATGGGCAGTCAGCCACACGTCGGAGTCTCTCACCATTGTTTGTTGGAGATATAACTTTGCATGCAGTGCGATGTTCTTTTTTAGTGGACAGCTCTATGAGTTTCCACAAGTATGTAATACTCTTGACCAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................GGTGATGCCTTGGGTTCCAAGCCTTCCTA..................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |