| Gene: St5 | ID: uc009jds.1_intron_7_0_chr7_116678289_r.3p | SPECIES: mm9 |
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(7) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(23) TESTES |
| AGCAGGCCACCAAGGGAACTGAATGGTCATTGAGGGCCAAGAGAAACAGGAAGGGTACAAGATCCTGGCAGGACAGCTTTTGTGTCTCCAGGCTTCTGGTCCAGCTTGGTCAGAGACCAGGTTGCCCTCTTCTCTGTCAGAGAGGTGGAGAAGGCAGCTCCCGACACTCTTTCTCTTTGGGCTGCTGGTGGTGGGCACAGGTCCTAGATGAGGTGGAGCGCCGGCGTGGGATCTCAGCTGCACTGGTCTA ........................................................................................................................................................((((((((..((.........))...)))))))).(((.....))).................................................... .................................................................................................................................................146...................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCA..................................................... | 22 | 1 | 42.00 | 42.00 | 20.00 | 12.00 | 1.00 | - | 4.00 | 1.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCAC.................................................... | 23 | 1 | 35.00 | 35.00 | 23.00 | 5.00 | 2.00 | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCACAG.................................................. | 23 | 1 | 33.00 | 33.00 | - | 3.00 | 8.00 | 11.00 | - | 1.00 | 2.00 | 3.00 | 1.00 | 1.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCACAG.................................................. | 24 | 1 | 28.00 | 28.00 | 3.00 | 2.00 | 7.00 | 6.00 | - | - | 1.00 | 5.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCACAG.................................................. | 25 | 1 | 28.00 | 28.00 | 11.00 | - | 6.00 | 1.00 | 1.00 | - | 3.00 | 3.00 | - | - | - | - | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCA..................................................... | 20 | 1 | 25.00 | 25.00 | - | 5.00 | 3.00 | 2.00 | 4.00 | 4.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCA..................................................... | 21 | 1 | 19.00 | 19.00 | 9.00 | 4.00 | - | - | 4.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCAC.................................................... | 21 | 1 | 11.00 | 11.00 | - | 3.00 | - | - | - | 1.00 | 2.00 | - | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCAC.................................................... | 22 | 1 | 10.00 | 10.00 | - | 5.00 | - | - | - | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCACg................................................... | 22 | g | 9.00 | 11.00 | - | - | - | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCAa.................................................... | 21 | a | 9.00 | 25.00 | - | - | 2.00 | - | 3.00 | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCAag................................................... | 22 | ag | 9.00 | 25.00 | - | 5.00 | - | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGC...................................................... | 21 | 1 | 8.00 | 8.00 | - | - | - | 5.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGC...................................................... | 19 | 1 | 8.00 | 8.00 | 4.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCACA................................................... | 22 | 1 | 8.00 | 8.00 | - | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCACA................................................... | 24 | 1 | 7.00 | 7.00 | - | - | 3.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCAaa................................................... | 22 | aa | 7.00 | 25.00 | 3.00 | - | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTG......................................................... | 18 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCAa.................................................... | 22 | a | 6.00 | 19.00 | - | 1.00 | - | - | 4.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCAa.................................................... | 23 | a | 6.00 | 42.00 | - | 2.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCAg.................................................... | 23 | g | 5.00 | 42.00 | - | 4.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCACA................................................... | 23 | 1 | 4.00 | 4.00 | - | - | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCACAGt................................................. | 25 | t | 3.00 | 28.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCAaa................................................... | 23 | aa | 3.00 | 19.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCACt................................................... | 22 | t | 2.00 | 11.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCACAGa................................................. | 26 | a | 2.00 | 28.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCAg.................................................... | 22 | g | 2.00 | 19.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCACg................................................... | 23 | g | 1.00 | 10.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................AAGGCAGCTCCCGACACaag................................................................................ | 20 | aag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGAGGTGGAGCGCCGGCGTGGGA................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TCTGTCAGAGAGGTGGAG.................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TTTGTGTCTCCAGGCgaga......................................................................................................................................................... | 19 | gaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCACAGag................................................ | 27 | ag | 1.00 | 28.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTGGGCTGCTGGTGGTGGGCAata.................................................. | 24 | ata | 1.00 | 19.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCACAtag................................................ | 27 | tag | 1.00 | 7.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCc..................................................... | 20 | c | 1.00 | 8.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTGGGCTGCTGGTGGTGGGCAaa................................................... | 24 | aa | 1.00 | 42.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TTGAGGGCCAAGAGAAACAGGAAGGGT.................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCAagt.................................................. | 23 | agt | 1.00 | 25.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGGGCTGCTGGTGGTGGGCACAGa................................................. | 24 | a | 1.00 | 33.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGCAGGCCACCAAGGGAACTGAATGGTCATTGAGGGCCAAGAGAAACAGGAAGGGTACAAGATCCTGGCAGGACAGCTTTTGTGTCTCCAGGCTTCTGGTCCAGCTTGGTCAGAGACCAGGTTGCCCTCTTCTCTGTCAGAGAGGTGGAGAAGGCAGCTCCCGACACTCTTTCTCTTTGGGCTGCTGGTGGTGGGCACAGGTCCTAGATGAGGTGGAGCGCCGGCGTGGGATCTCAGCTGCACTGGTCTA ........................................................................................................................................................((((((((..((.........))...)))))))).(((.....))).................................................... .................................................................................................................................................146...................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................CCCGACACTCTTgtct............................................................................... | 16 | gtct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................GCTCCCGACACTCTgaat................................................................................ | 18 | gaat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |