| Gene: Ric3 | ID: uc009jdg.1_intron_3_0_chr7_116200331_r.3p | SPECIES: mm9 |
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(1) OTHER.ip |
(3) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| TGATTTGATCTTTGCTTCAATCATTTTTACCTTCTTGACTCAGTGGCTTTAAAAAGACATTTCTCTAATGTTGATGCTTGCTTGATTTCTGACTTAATTTTTGTCTCCCAGCTCTTTTTGTTTTTTCATTTAACATGAGGTGTTCCGTGACTTTGAGGTTCTGAGCTGCTGTTGATGTGCTGTGCCTCCTTCATCCTCAGCTTTCAAAGGGGAAAACTGCAGAGGATCGGAACTGCTCCACTGCCCCACC ...........................................................................((..((.........(((.........)))...((((((...........((((..(((((...)))))..))))............))))))..........))...))................................................................. ..........................................................................75..............................................................................................................187............................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................TTTCAAAGGGGAAAACTGCAGAGGATC...................... | 27 | 1 | 9.00 | 9.00 | 1.00 | 2.00 | 2.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................GGTTCTGAGCTGCTGTTGATGTGCTGT................................................................... | 27 | 1 | 6.00 | 6.00 | 1.00 | 2.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AAAACTGCAGAGGATCGGAACTGCTCC........... | 27 | 1 | 4.00 | 4.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TTTCAAAGGGGAAAACTGCAGAGGAT....................... | 26 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................................TTTGAGGTTCTGAGCTGCTGTTGATGT........................................................................ | 27 | 1 | 3.00 | 3.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TTCAAAGGGGAAAACTGCAGAGGATC...................... | 26 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AAAACTGCAGAGGATCGGAACTGCTCCAC......... | 29 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................AGGTGTTCCGTGACTTTGAGGTTCT........................................................................................ | 25 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................ACATGAGGTGTTCCGTGACTTTGAGGT........................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................ACTTTGAGGTTCTGAGCTGCTGTTGATGT........................................................................ | 29 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TTCAAAGGGGAAAACTGCAGAGGATCGG.................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................AGGTGTTCCGTGACTTTGAGGTTCTGA...................................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................ACTTTGAGGTTCTGAGCTGCTGTTGATG......................................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................ACTTTGAGGTTCTGAGCTGCTGTTG............................................................................ | 25 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................AACTGCAGAGGATCGGAACTGCTCCAC......... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................AGCTGCTGTTGATGTGCTGTGCCTCC............................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................................................GCTTTCAAAGGGGAAAACTGCAGAGGAT....................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................ACATGAGGTGTTCCGTGACTTTGAGGTT.......................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGAGGTTCTGAGCTGCTGTTGATGT........................................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................AGGTTCTGAGCTGCTGTTGATGTGC...................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GAGGTTCTGAGCTGCTGTTGATGTGC...................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TTTCAAAGGGGAAAACTGCAGAGGATCt..................... | 28 | t | 1.00 | 9.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TTTGAGGTTCTGAGCTGCTGTTGATG......................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................TTTCAAAGGGGAAAACTGCAGAGGA........................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................AAACTGCAGAGGATCGGAACTGCTCC........... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TTCCGTGACTTTGAGGTTCTGAccgc.................................................................................. | 26 | ccgc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................GTTCTGAGCTGCTGTTGATGTGCTG.................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TCAAAGGGGAAAACTGCAGAGGATCGG.................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TTCTGAGCTGCTGTTGATGTGCTGT................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TCAAAGGGGAAAACTGCAGAGGATCG..................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................AGGTGTTCCGTGACTTTGAGGTTC......................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................AGCTGCTGTTGATGTGCTGTGttt............................................................... | 24 | ttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................GCTTGATTTCTGACTTctt........................................................................................................................................................ | 19 | ctt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................AGGTTCTGAGCTGCTGTTGATGTGCTG.................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TCTGAGCTGCTGTTGATGTGCTGTGCC................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................TTTGAGGTTCTGAGCTGCTGTTGATGTt....................................................................... | 28 | t | 1.00 | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TGCAGAGGATCGGAACTGCTCCACTGC...... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TTTTTTCATTTAACATGAGGTGTTC......................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................................TCTGAGCTGCTGTTGATGTGCTGTGCCTC.............................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................ACTTTGAGGTTCTGAGCTGCTGTTtatt......................................................................... | 28 | tatt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TGCAGAGGATCGGAACTGCTCCACTGCCC.... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGATTTGATCTTTGCTTCAATCATTTTTACCTTCTTGACTCAGTGGCTTTAAAAAGACATTTCTCTAATGTTGATGCTTGCTTGATTTCTGACTTAATTTTTGTCTCCCAGCTCTTTTTGTTTTTTCATTTAACATGAGGTGTTCCGTGACTTTGAGGTTCTGAGCTGCTGTTGATGTGCTGTGCCTCCTTCATCCTCAGCTTTCAAAGGGGAAAACTGCAGAGGATCGGAACTGCTCCACTGCCCCACC ...........................................................................((..((.........(((.........)))...((((((...........((((..(((((...)))))..))))............))))))..........))...))................................................................. ..........................................................................75..............................................................................................................187............................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................TAACATGAGGTGTTCCGTGACTTTGA.............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................GTGCCTCCTTCATCCTCAGCTTTCA............................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TGTGCTGTGCCTCCTTCATCCTCA................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |