| Gene: Rrm1 | ID: uc009irp.1_intron_13_0_chr7_109609366_f.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.ip |
(8) TESTES |
| CCCAGGCTGCTTCTGAGCAATATGCTTAATGGAGCCATGTCTAAGACTCAGTGCAGCTAACGTCCCTTAATGTGTTGACTACAAGATGCAGTGGCTGGAATGTGGGGATATGGCAGTTAGTTATTTTAAAAAAATTTTTTTGGTCATTGTTTTAAATTGCCCCAAAGTAACATCATAACTGTGGGGTATTTATCTCTTAGATTCTTCAGTATGACATGTGGAATGTTGCTCCTACAGACCTGTGGGACTG .......................................................................................................(((((((.(((....((..((((.....))))..))...)))............(((((((.(((.........))).)))))))..)))))))..................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................TTTTTGGTCATTGTTTTAAATTGCCCCAAAGTAACATCATAACTGTGGGGTA.............................................................. | 52 | 1 | 80.00 | 80.00 | 80.00 | - | - | - | - | - | - | - |
| ...............................................................................................TGGAATGTGGGGATATG.......................................................................................................................................... | 17 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGACATGTGGAATGTTGCTCCTACAGAC........... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................................................................TCAGTATGACATGTGGAATGT........................ | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................GTGGAATGTTGCTCCTACAGACCTGTGGGAC.. | 31 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AGTATGACATGTGGAAT.......................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 |
| ...............................GAGCCATGTCTAAGACTCAGTGCAGCTAACG............................................................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| ..CAGGCTGCTTCTGAGCA....................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................GTATGACATGTGGAATGTTGCTCCT................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................AACATCATAACTGTGGGGTATTT........................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................TTCTTCAGTATGACATGTGGAATGTTGC..................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................................GTGGAATGTTGCTCC.................. | 15 | 4 | 0.25 | 0.25 | - | - | 0.25 | - | - | - | - | - |
| CCCAGGCTGCTTCTGAGCAATATGCTTAATGGAGCCATGTCTAAGACTCAGTGCAGCTAACGTCCCTTAATGTGTTGACTACAAGATGCAGTGGCTGGAATGTGGGGATATGGCAGTTAGTTATTTTAAAAAAATTTTTTTGGTCATTGTTTTAAATTGCCCCAAAGTAACATCATAACTGTGGGGTATTTATCTCTTAGATTCTTCAGTATGACATGTGGAATGTTGCTCCTACAGACCTGTGGGACTG .......................................................................................................(((((((.(((....((..((((.....))))..))...)))............(((((((.(((.........))).)))))))..)))))))..................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
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| ..................................................................................................................................................................................................................................CTCCTACAGACCTGTgt....... | 17 | gt | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - |