| Gene: Rhog | ID: uc009irk.1_intron_0_0_chr7_109388827_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| CAGAGCCGCCGCCGCCGCCCCCAGCTCCCCCGCCGCGGGGAGGGCACCAGGTGAGGCCCGGGTCGAGCCCGTCGGGCAGGGGTCCTGGGAAGAGGAGTTCAAGCTGGCCCGGACTGGGTACCCGGGAGCCGGGAAGTTTGCAGGAGGGAGGCCGAGGGCGGGAGGTTTTCGTTCACTGCAAGTTGGGCGGGCGCGGCAGGCCGGGCGGGGACAGCGGCCACCGCGACCCGATCGCTGGTGGCCGGGTTGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................TGCAAGTTGGGCGGGCGCGGCAGGC................................................. | 25 | 1 | 17.00 | 17.00 | 16.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................CCCGCCGCGGGGAGGGCAC........................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................GGGTCCTGGGAAGAGGAagg....................................................................................................................................................... | 20 | agg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................TGGGAAGAGGAGTTCAAGCTGGCCC............................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................TCCCCCGCCGCGGGGAGGGCACCAGGT...................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................TCACTGCAAGTTGGGCGGGCGCGGC..................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................................CACTGCAAGTTGGGCGGGCGCGGC..................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TCGTTCACTGCAAGTTGGGCGGGCGC........................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................AGGCCCGGGTCGAGCCC.................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GCCGGGCGGGGACAGCGG................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| CAGAGCCGCCGCCGCCGCCCCCAGCTCCCCCGCCGCGGGGAGGGCACCAGGTGAGGCCCGGGTCGAGCCCGTCGGGCAGGGGTCCTGGGAAGAGGAGTTCAAGCTGGCCCGGACTGGGTACCCGGGAGCCGGGAAGTTTGCAGGAGGGAGGCCGAGGGCGGGAGGTTTTCGTTCACTGCAAGTTGGGCGGGCGCGGCAGGCCGGGCGGGGACAGCGGCCACCGCGACCCGATCGCTGGTGGCCGGGTTGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................GGGAGGTTTTCGTTCACTGCAAGTTGG................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................CCCCAGCTCCCCCGCt......................................................................................................................................................................................................................... | 16 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................CCCGGGTCGAGCCCGTC................................................................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |