| Gene: Clpb | ID: uc009ipd.1_intron_15_0_chr7_108936250_f.3p | SPECIES: mm9 |
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(1) OTHER.ip |
(4) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| GTTTCAGCTTGACACGTCACCTGGGAAAATAGGGACTCAGTTGAGGAAACTGTCCTATTTGGTTGGCTGGTGGGCAAGACTGTGGGCATTTTTTAAAGGCAAATTTAGGAAAGAGGGCCCAGTATACTTTAATTTAAAAAAACAAAAAAACAAAAACTACTTTTAATGATGGTTCTTAAATGTTTTAACCTCACTTGTAGCCCACCACCCACCGGAAGTAGTGGGAAAGAAAGACTACGGGGGAAGTGGA ............................................................((((.(((....)))..)))).(((((.(((((((((......)))))))))....)))))................................................................................................................................. .....................................................54..................................................................................138.............................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | mjTestesWT2() Testes Data. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
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| .........................................TGAGGAAACTGTCCTATTTGGTTGGCT...................................................................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................TGAGGAAACTGTCCTATTTGGTTGGC....................................................................................................................................................................................... | 26 | 1 | 5.00 | 5.00 | - | 1.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................TGGGAAAATAGGGACTCAGTTGAGGA........................................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TAGGAAAGAGGGCCCAGTATACTTTAATT.................................................................................................................... | 29 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGGGAAAATAGGGACTCAGTTGAGG............................................................................................................................................................................................................ | 25 | 1 | 3.00 | 3.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TTGGTTGGCTGGTGGGCAAGACTGTGG..................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................GGAAGTAGTGGGAAAGAAAGACTACGG.......... | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TGTCCTATTTGGTTGGCTGGTGGGCA.............................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TGGGAAAGAAAGACTACGGGGGAAGT... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................TGTCCTATTTGGTTGGCTGGTGGGC............................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TGGGAAAGAAAGACTACGGGGGAAGTGG. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TGGGCAAGACTGTGGGCATTTTTTA........................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................GCAAGACTGTGGGCATTTTTTAAAGGC...................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................GAGGAAACTGTCCTATTTGGTTGGCTGt.................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ACCGGAAGTAGTGGGAAAGAAAGACT.............. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TGACACGTCACCTGGGAAAATAGGGACT..................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TAGGAAAGAGGGCCCAGTATACTTTAA...................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................CAAGACTGTGGGCATTg............................................................................................................................................................... | 17 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................CTGTCCTATTTGGTTGGCTGGTGGGCA.............................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TTGACACGTCACCTGGGAAAATAGGG........................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................CTCACTTGTAGCCCACCACCCACCGGA.................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGGGAAAATAGGGACTCAGTTGAGGAAAa........................................................................................................................................................................................................ | 29 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGGGAAAATAGGGACTCAGTTGAGGAA.......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TGTCCTATTTGGTTGGCTGGTGGGCAA............................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TGGGAAAGAAAGACTACGGGGGAAGTG.. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CGGAAGTAGTGGGAAAGAAAGACTAC............ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................CAAGACTGTGGGCATTga.............................................................................................................................................................. | 18 | ga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTGTAGCCCACCACCCACCGGAAGTAGT............................ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................GGCTGGTGGGCAAGACTGTGG..................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........TGACACGTCACCTGGGAAAATAGGGAC...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ACCGGAAGTAGTGGGAAAGAAAGACTAC............ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TTTTAAAGGCAAATTTAGGAAAGAGGGC.................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................TTTGGTTGGCTGGTGGGCAAGACTG........................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................AAGACTGTGGGCATTgatg............................................................................................................................................................ | 19 | gatg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................TTTGGTTGGCTGGTGGGCAAGACTGTGt..................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................TAAAGGCAAATTTAGGAAAGAGGG..................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TAAATGTTTTAACCTCACTTGTAGCCC............................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................AAGGCAAATTTAGGAAAGAGGGCCCAG................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TTTGGTTGGCTGGTGGGCAAGACTGT....................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TCCTATTTGGTTGGCTGGTGGGCAAG............................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................................................................................TGGGAAAGAAAGACTACGGGGGAAGTGt. | 28 | t | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TCCTATTTGGTTGGCTGGTGGGCAA............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................................................................AGTAGTGGGAAAGAAAGACTACGGGG........ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CGGAAGTAGTGGGAAAGAAAGACTACGGG......... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................TTGAGGAAACTGTCCTATTTGGTTGGC....................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TAATGATGGTTCTTAAATGTTTTAACCTC.......................................................... | 29 | 17 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.06 |
| GTTTCAGCTTGACACGTCACCTGGGAAAATAGGGACTCAGTTGAGGAAACTGTCCTATTTGGTTGGCTGGTGGGCAAGACTGTGGGCATTTTTTAAAGGCAAATTTAGGAAAGAGGGCCCAGTATACTTTAATTTAAAAAAACAAAAAAACAAAAACTACTTTTAATGATGGTTCTTAAATGTTTTAACCTCACTTGTAGCCCACCACCCACCGGAAGTAGTGGGAAAGAAAGACTACGGGGGAAGTGGA ............................................................((((.(((....)))..)))).(((((.(((((((((......)))))))))....)))))................................................................................................................................. .....................................................54..................................................................................138.............................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | mjTestesWT2() Testes Data. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
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