| Gene: BC044745 | ID: uc009inp.1_intron_0_0_chr7_107823678_f.5p | SPECIES: mm9 |
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(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(11) TESTES |
| TGGCTGCCAGAGAGCAGAGTGTGGACAGCTTGGAGTGCTTTGGGTCTAAGGTATGCTGAATCCAGTGCCAGCCATCTTGGCAGCTCTGAGGGTGGCTGTTTGAAGCAGGAGGGGACCAGGGCCACTCAGCAAGGTCCCTGTCATCAGAAGTCTTAAGCCTTGGCTGGCTCCTCTGTGGTGGCAACTACCTTGTCAAAACCCTCTGGAGCTCTGGAGCTCTCTCAATAAAATCCTTACTACTGTTCAAATA ................................................................................(((((...(((((((((.(((((....((.(((((((...((......))..))))))).)).)))))))))....)))))))))).................................................................................... ...............................................................................80.......................................................................................169............................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................TGGGTCTAAGGTATGCTGAATCCAGT........................................................................................................................................................................................ | 26 | 1 | 10.00 | 10.00 | 7.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................TCTGAGGGTGGCTGTTTGAAGCAGGA............................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - |
| ..............................TGGAGTGCTTTGGGTCTAAGGTATGC.................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................TGGGTCTAAGGTATGCTGAATCCcgt........................................................................................................................................................................................ | 26 | cgt | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TCTTGGCAGCTCTGAGGGTGGCTGT....................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................TGTCATCAGAAGTCTTAAGCCTTGGCT..................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................TGGGTCTAAGGTATGCTGAATCCAG......................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................TGGGTCTAAGGTATGCTGAATCCAGTGCC..................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................TAAGGTATGCTGAATCCAGTGCCAGC.................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................TTGGAGTGCTTTGGGTCTAAGGTATG................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................TTTGGGTCTAAGGTATGCTGAATCCA.......................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGGAGCTCTCTCAATAAAATCCTTACTACT......... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TGGCTGGCTCCTCTGTGGTGGCAACTACC............................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................TGGGTCTAAGGTATGCTGAATCCAGTGCCA.................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................TTGGAGTGCTTTGGGTCTAAGGTAT.................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........GAGCAGAGTGTGGACAGCTTGGAG....................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................AGTGCTTTGGGTCTAAGGTATGCTGA............................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGTCATCAGAAGTCTTAAGCCTTGGCTG.................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGAAGCAGGAGGGGACCAGGGCCcaa............................................................................................................................ | 26 | caa | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................TGAAGCAGGAGGGGACCAGGGCCAt............................................................................................................................. | 25 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................TGCTTTGGGTCTAAGGTATGCTGAATCC........................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........GAGCAGAGTGTGGACAGCTTGGAGT...................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........AGAGAGCAGAGTGTGGACAGCTTGG......................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................TGAGGGTGGCTGTTTGAAGCAGGA............................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGAAGCAGGAGGGGACCAGGGCCAC............................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................TGTGGACAGCTTGGAaga..................................................................................................................................................................................................................... | 18 | aga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........AGAGCAGAGTGTGGACAGCTTGGAGT...................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................TGGGTCTAAGGTATGCTGAATCCAGTGCa..................................................................................................................................................................................... | 29 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TTGAAGCAGGAGGGGACCAGGGC................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCAGAAGTCTTAAGCCTTGGCTGGCTCC............................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TGTTTGAAGCAGGAGGGGACCAGGGCCA.............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................TTTGGGTCTAAGGTATGCTGAATCCAG......................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................GAGTGCTTTGGGTCTAAGGTATGC.................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TGGAGTGCTTTGGGTCTAAGGTATG................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................TGGCAGCTCTGAGGGTGGCTGTTTGAAG................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................GAGTGTGGACAGCTTGGAGTGCTTTG................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGTCATCAGAAGTCTTAAGCCTTGGC...................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................TGGGTCTAAGGTATGCTGAATCCAGggc...................................................................................................................................................................................... | 28 | ggc | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............GCAGAGTGTGGACAGCTTGGAGTG..................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGTCATCAGAAGTCTTAAGCCTTGGCTGG................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TGGCTGGCTCCTCTGTGGTGGC.................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TCTGTGGTGGCAACTACCTTGTCAAAA.................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCAGAAGTCTTAAGCCTTGGCTGGCTCCT.............................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................GCTCTGAGGGTGGCTGTTTGAAGCA............................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGTCATCAGAAGTCTTAAGCCTTGGCTt.................................................................................... | 28 | t | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................TGAGGGTGGCTGTTTGAAGCAGGAGG.......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................TGGGTCTAAGGTATGCTGAATCCAGTGt...................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| TGGCTGCCAGAGAGCAGAGTGTGGACAGCTTGGAGTGCTTTGGGTCTAAGGTATGCTGAATCCAGTGCCAGCCATCTTGGCAGCTCTGAGGGTGGCTGTTTGAAGCAGGAGGGGACCAGGGCCACTCAGCAAGGTCCCTGTCATCAGAAGTCTTAAGCCTTGGCTGGCTCCTCTGTGGTGGCAACTACCTTGTCAAAACCCTCTGGAGCTCTGGAGCTCTCTCAATAAAATCCTTACTACTGTTCAAATA ................................................................................(((((...(((((((((.(((((....((.(((((((...((......))..))))))).)).)))))))))....)))))))))).................................................................................... ...............................................................................80.......................................................................................169............................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................AGCAAGGTCCCTGTCATCAGAAGTCTTA............................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................GCAAGGTCCCTGTCATCAGAAGTCTTA............................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................GCTCCTCTGTGGTGGCAACTACCTTGTCA....................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................AGCTCTGGAGCTCTCTCAATAAAATCCTT............... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................ACAGCTTGGAGTGCTTTGGGTCTAAG........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................GCCACTCAGCAAGGTCCCTGTCATCAGA...................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................CAAGGTCCCTGTCATCAGAAGTCTTA............................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................AAGGTCCCTGTCATCAGAAGTCTTA............................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................GTGCTTTGGGTCTAAGGTATGCTGAATCCA.......................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................CAAGGTCCCTGTCATCAGAAGTCTTAa............................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................................................................................TCTCTCAATAAAATCCTTACTACTGT....... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................ACAGCTTGGAGTGCTTTGGGTCTAAGGTA..................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CTCTCTCAATAAAATCCTTACTACTGTT...... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................CTGGAGCTCTGGAGCTCTCTCAATAAAAgag.................... | 31 | gag | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |