| Gene: Capn5 | ID: uc009ikc.1_intron_3_0_chr7_105274953_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(6) TESTES |
| AGCACAAGGGCCTCTGTGCTTTTCATACCCTTCCCTTCAGCCCTAACCAAACACTAACCTAATCTTGTCCTTATAGATGTGCTAGTTCTGGATATTGTCTGTCTGTGTATCCTACTGATCCTTTCGTGGTAGCCACTTGGAGATGGGATAGTCTCTGATGCGGGGCTGTTTATGCCCCATCTCCTCTTGTCTCCACACAGGTGGAAGAGAACCGCCAATACCGTATGCACAGCCTACAGCATAAGGCCGC ......................................................................................................((((((.................((((...))))..(((((((((((((((((......))))))))......)))))))))..........)))))).................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................TCGTGGTAGCCACTTGGAGATG......................................................................................................... | 22 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - |
| ...........................................................................................................................TCGTGGTAGCCACTTGGAGATGG........................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - |
| ...........................................................................................................................TCGTGGTAGCCACTTGGAGAT.......................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 |
| ...........................................................................................................................TCGTGGTAGCCACTTGGAGATGGt....................................................................................................... | 24 | t | 1.00 | 1.00 | 1.00 | - | - | - | - | - |
| AGCACAAGGGCCTCTGTGCTTTTCATACCCTTCCCTTCAGCCCTAACCAAACACTAACCTAATCTTGTCCTTATAGATGTGCTAGTTCTGGATATTGTCTGTCTGTGTATCCTACTGATCCTTTCGTGGTAGCCACTTGGAGATGGGATAGTCTCTGATGCGGGGCTGTTTATGCCCCATCTCCTCTTGTCTCCACACAGGTGGAAGAGAACCGCCAATACCGTATGCACAGCCTACAGCATAAGGCCGC ......................................................................................................((((((.................((((...))))..(((((((((((((((((......))))))))......)))))))))..........)))))).................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................GCCAATACCGTATGCACAGCCTACAGCA......... | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - |
| ....................................CCCTAACCAAACACTgaac................................................................................................................................................................................................... | 19 | gaac | 1.00 | 0.00 | 1.00 | - | - | - | - | - |
| .............................................AACACTAACCTAATacag........................................................................................................................................................................................... | 18 | acag | 1.00 | 0.00 | - | - | 1.00 | - | - | - |