| Gene: Iqgap1 | ID: uc009ibc.1_intron_21_0_chr7_87888847_r | SPECIES: mm9 |
|
|
|
(3) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| TCAAGGTGGAATCTGGCAGTCCAACAAAGACACCCAAGAGGCCCAGAGGTGTAAGTATCCATGTGTCTGTTGTCTGGCTCACGTGTAGGTGGAGGGTGAGGTCAACAGGTGCTGGGCAGGGTAGCTGGCCAGTAGGTATGCTGGGTGAAGTCATGTGAACACAGACAGCCCCTAAATTGCTCCATTAATAACTCTCTTCCGAGACAGTTGCCTTAGGAATCTCTGCCATCAATGAAGCAGTAGACAGCGGTGATGTT ..................................................................(((((((((.((((.((......))..)))).))).)))))).((((((.(((.....))).))))))((...((.((((...(((.(((....)))))).)))).......)).)).........((((....))))..................................................... ..................................................................67..........................................................................................................................................207................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................................ATTAATAACTCTCTTCCGAGACAG.................................................. | 24 | 1 | 49.00 | 49.00 | 7.00 | 10.00 | 9.00 | 5.00 | 4.00 | 3.00 | 2.00 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................CATTAATAACTCTCTTCCGAGACAG.................................................. | 25 | 1 | 7.00 | 7.00 | - | - | - | 2.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - |
| .....................................................................................................................................................................................CCATTAATAACTCTCTTCCGAGACAG.................................................. | 26 | 1 | 7.00 | 7.00 | 5.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................................................................AATTGCTCCATTAATAACTCTCTTCCGAGACAG.................................................. | 33 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................ATTAATAACTCTCTTCCGAGACAGaaaa.............................................. | 28 | aaaa | 3.00 | 49.00 | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................CATTAATAACTCTCTTCCGAGACAGa................................................. | 26 | a | 3.00 | 7.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................ATTAATAACTCTCTTCCGAGACAGa................................................. | 25 | a | 3.00 | 49.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................ATTAATAACTCTCTTCCGAGACAt.................................................. | 24 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .CAAGGTGGAATCTGGCAGTCCAACAAAGA................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................ATAACTCTCTTCCGAGACAGaga............................................... | 23 | aga | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................AATGAAGCAGTAGACAGCGGTGATGTT | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................GTCTGGCTCACGTcggc......................................................................................................................................................................... | 17 | cggc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................ATAACTCTCTTCCGAGACAG.................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................CCATTAATAACTCTCTTCCGAGACAGa................................................. | 27 | a | 1.00 | 7.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TTAGGAATCTCTGCCATCAATGAAGCAGT................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................................ATTAATAACTCTCTTCCGAGACAGagaa.............................................. | 28 | agaa | 1.00 | 49.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TCTCTTCCGAGACAG.................................................. | 15 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - |
| TCAAGGTGGAATCTGGCAGTCCAACAAAGACACCCAAGAGGCCCAGAGGTGTAAGTATCCATGTGTCTGTTGTCTGGCTCACGTGTAGGTGGAGGGTGAGGTCAACAGGTGCTGGGCAGGGTAGCTGGCCAGTAGGTATGCTGGGTGAAGTCATGTGAACACAGACAGCCCCTAAATTGCTCCATTAATAACTCTCTTCCGAGACAGTTGCCTTAGGAATCTCTGCCATCAATGAAGCAGTAGACAGCGGTGATGTT ..................................................................(((((((((.((((.((......))..)))).))).)))))).((((((.(((.....))).))))))((...((.((((...(((.(((....)))))).)))).......)).)).........((((....))))..................................................... ..................................................................67..........................................................................................................................................207................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|