| Gene: Prc1 | ID: uc009iaf.1_intron_5_0_chr7_87450954_f | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(5) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(18) TESTES |
| AGCCTGTGGAGGCAATTATGACTGGATCAAAAACCAAAATCAGGAATGCGGTAAGAAAACCAGTGCATGATGGGTAAATAGTGTTCTCTTAGCATTTCTGGGTCTAGTCTAATGTCCTTACTAGCTAATCTCTTGGGCCAGCAAAGACATGTTCTATTTTGGCACATTTCCTAAATTTCTGACTCTTACGATGTTGTTATAAAGCATGTTGTTGATTTATAGGTTCATGCTGTTAAGCATGGATAGACAAACAAGGGAATAGATAGAAGTATGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATATGTATATGTATGTATGTATATATCCTTTGTCGTCTTCTTTCAGCTGAAATTAGAAGTGGATCGGTTAGAAGAACTGAAAATGCAAAACATAAA .....................................................................................................................................................................................................................................................................((.(((((...(((((((((..((..((..((((..(((...........)))..))))..))..))..)))))))))........))))).)).................................................... .................................................................................................................................................................................................................................................................258................................................................................................357................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) |
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| ...............................................................................................................................................................................................TGTTGTTATAAAGCATGTTGTTGATTTATAGGTTCATGCTGTTAAGCATGGA.................................................................................................................................................................... | 52 | 1 | 31.00 | 31.00 | 31.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................TGAAATTAGAAGTGGATCGGTTAGAA....................... | 26 | 1 | 7.00 | 7.00 | - | 2.00 | 1.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................TGAAATTAGAAGTGGATCGGTTAGAAG...................... | 27 | 1 | 6.00 | 6.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................TGAAATTAGAAGTGGATCGGTTAGAAGt..................... | 28 | t | 3.00 | 6.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................TAGAAGTGGATCGGTTAGAAGAACTGAAAAT............ | 31 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................GATCGGTTAGAAGAACTG................. | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................TAGAAGTGGATCGGTTAGA........................ | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................TGAAATTAGAAGTGGATCGGTTAGAAt...................... | 27 | t | 1.00 | 7.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................TGAAATTAGAAGTGGATCGGTTAGA........................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................AGTGGATCGGTTAGAAGAACTGAAA.............. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................TGAAATTAGAAGTGGATCGGTTAGAAGtt.................... | 29 | tt | 1.00 | 6.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................ATTAGAAGTGGATCGGTTAG......................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................CTGAAATTAGAAGTGGATCGGTTAGAA....................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................AAGTGGATCGGTTAGAAGAACTGAAA.............. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................AAATTAGAAGTGGATCGGTTAGAAGA..................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................TAGAAGTGGATCGGTTAGAAGAACTG................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................TGAAATTAGAAGTGGATCGGTTAGAAGA..................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................CCTTACTAGCTAATCTCTTGGGCCAG.......................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................TGAAATTAGAAGTGGATCGGTTAGAAGAAC................... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................TAGAAGTGGATCGGTTAGAAGA..................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................................................................................................................................................................................................................................................................................................GTGGATCGGTTAGAAGAACTGAA............... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| AGCCTGTGGAGGCAATTATGACTGGATCAAAAACCAAAATCAGGAATGCGGTAAGAAAACCAGTGCATGATGGGTAAATAGTGTTCTCTTAGCATTTCTGGGTCTAGTCTAATGTCCTTACTAGCTAATCTCTTGGGCCAGCAAAGACATGTTCTATTTTGGCACATTTCCTAAATTTCTGACTCTTACGATGTTGTTATAAAGCATGTTGTTGATTTATAGGTTCATGCTGTTAAGCATGGATAGACAAACAAGGGAATAGATAGAAGTATGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATATGTATATGTATGTATGTATATATCCTTTGTCGTCTTCTTTCAGCTGAAATTAGAAGTGGATCGGTTAGAAGAACTGAAAATGCAAAACATAAA .....................................................................................................................................................................................................................................................................((.(((((...(((((((((..((..((..((((..(((...........)))..))))..))..))..)))))))))........))))).)).................................................... .................................................................................................................................................................................................................................................................258................................................................................................357................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) |
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