(1)
OTHER.ip
(6)
OTHER.mut
(1)
OVARY
(4)
PIWI.ip
(1)
PIWI.mut
(27)
TESTES

Sense strand
TACCCTACTGAGTACAACATCTTCCCACGCACCTGGTGCCTCCCTGCGGAGTGAGTGAGCTCAGACCCATGGACACGATGAGGAGTCACTCTCTGTGCTCTTAATGACCCAGATGTGTTTCAGAGGGCTGGAATGGGTCCAAGAAAGATTCAGCTGGCTGGGAGTGGTGGCTCAGACTTTTAATCCCAGTACTTGGGAGGCAGAGGCAGGTGAATTTCTGTAAATCTGAGACCAGTCTGGATTACATAGCAAGTACAGGATAGCCAGGGTTATAGAGACTTTCTCAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGTTCAGCTGCCCAAGCAAAGTGGGTCCAGAGCTAAGTGCTCCAGGAAGAACCTGGAGGTAGATAACAAGAAGGTGGCCATGGGGATCCCAGGACAGGCAAGGATGCACAGAAACCCTTTGACCAGCCTCTCTCTGCACGTAGCTATGGGGACTTCCAGGCCTACGGTCGTCAGCGGAAAACCCGCACTTATA
..............................................................................................................................................................................................................(((((...(((((....(((((.....((((((((((.(((.((.......((....)).((((......((((((((............................)))))))).....))))..))...))))))))))).)).....(((((((.....))))))).)))))....)))))...))).))...............................................................................................................
.............................................................................................................................................................................................................206...............................................................................................................................................................................................400...........................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR037903(GSM510439)
testes_rep4. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGACTTCCAGGCCTACGGTCGTCAGC.................. 29 1 2.00 2.00 - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................TGAATTTCTGTAAATCTGAGACCAGTC................................................................................................................................................................................................................................................................................ 27 1 2.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGACTTCCAGGCCTACGGTCGTCA.................... 27 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACGGTCGTCAGCGGAAAACC.......... 23 1 2.00 2.00 - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGGCCTACGGTCGTCAGC.................. 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.............................................................................................................................................................................................................................................TGGATTACATAGCAAGTACAGGATAGCC.................................................................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................TAGATAACAAGAAGGTGGCCA................................................................................................................. 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGTCGTCAGCGGAAAACCCGCACTTATA 31 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.......................................................................................................................................................................................................................TTCTGTAAATCTGAGACCAGTCTGGAT........................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................CAGAGGCAGGTGAATTTCTGcct.............................................................................................................................................................................................................................................................................................. 23 cct 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGTCGTCAGCGGAAAACCCGCACTTA.. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TGGGAGGCAGAGGCAGGTGAATTTCTata............................................................................................................................................................................................................................................................................................... 29 ata 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACGTAGCTATGGGGACTTCCAGGC................................ 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................TGTAAATCTGAGACCAGTCTGGATTAC........................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TGGGAGGCAGAGGCAGGTGAATTTta.................................................................................................................................................................................................................................................................................................. 26 ta 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................TACATAGCAAGTACAGGATAGCCAGG................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACGTAGCTATGGGGACTTCCAGG................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.....TACTGAGTACAACATCTTCCCACGCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.........................................................AGCTCAGACCCATGGACACGATGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGGACAGGCAAGGATGCACAGAA................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................AGCAAAGTGGGTCCAGAGCTAAGTGC......................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................AGAGGCAGGTGAATTTCTaaaa.............................................................................................................................................................................................................................................................................................. 22 aaaa 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTATGGGGACTTtta................................... 18 tta 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
..........................................................................................................................................................................................................GAGGCAGGTGAATTTtttt................................................................................................................................................................................................................................................................................................ 19 tttt 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................TAACAAGAAGGTGGCCATGGGGA........................................................................................................... 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGGACAGGCAAGGATGCACAGAAAC.............................................................................. 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
........TGAGTACAACATCTTCCCACGCACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGACTTCCAGGCCTACGGTCGT...................... 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....TACTGAGTACAACATCTTCCCACGCACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGTCGTCAGCGGAAAACCCGCACTTAT. 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
..............................................................................................................................................................................................................................................................................................................................................................................ACCTGGAGGTAGATAACAAGAAGGTGG.................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................TAGCCAGGGTTATAGAGACTTTCTCAAA............................................................................................................................................................................................................................. 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................TTGGGAGGCAGAGGCAGGTGAATTTCagt................................................................................................................................................................................................................................................................................................ 29 agt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................TCCCTGCGGAGTGAGTGAGCTCAGt............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 25 t 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
..........................................................................................................................................................................................................................TGTAAATCTGAGACCAGTCTGGATTA......................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................TTGGGAGGCAGAGGCAGGTGAATTTta.................................................................................................................................................................................................................................................................................................. 27 ta 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................TGGACACGATGAGGAGTCACTCTCTGT............................................................................................................................................................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................................TTTAATCCCAGTACTTGGGAGGCAGggaa.............................................................................................................................................................................................................................................................................................................. 29 ggaa 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGCACGTAGCTATGGGGACTTCt.................................... 27 t 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGACTTCCAGGCCTACGGTCGTC..................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCTACGGTCGTCAGCGGAAAA............ 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................TAACAAGAAGGTGGCCATGGGGATCC........................................................................................................ 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................CAGAGGCAGGTGAATTTtat................................................................................................................................................................................................................................................................................................. 20 tat 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................TAGATAACAAGAAGGTGGCCATGGG............................................................................................................. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TTTAATCCCAGTACTTGGGAGGCAGAGGCttt........................................................................................................................................................................................................................................................................................................... 32 ttt 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................TGAGACCAGTCTGGATTACATAGCAAGT............................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TTTAATCCCAGTACTTGGGAGGCAGAGGCAcc........................................................................................................................................................................................................................................................................................................... 32 cc 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGACTTCCAGGCCTACGGTCGTCAG................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TGGGAGGCAGAGGCAGGTGAATTTttgt................................................................................................................................................................................................................................................................................................ 28 ttgt 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGCACGTAGCTATGGGGACTTC..................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................AGAGGCAGGTGAATTTCTtagg.............................................................................................................................................................................................................................................................................................. 22 tagg 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................TGAGACCAGTCTGGAcggc........................................................................................................................................................................................................................................................................ 19 cggc 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................AACAAGAAGGTGGCCATGGGGATCC........................................................................................................ 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TCAGCTGGCTGGGAGTGGTGGC.................................................................................................................................................................................................................................................................................................................................................. 22 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............TACAACATCTTCCCACGCACCTGGTGCCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 31 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................TCTGAGACCAGTCTGGATTACATAGCAAGT............................................................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
....................................................................................................................................................TTCAGCTGGCTGGGAGTGGTGGCTat............................................................................................................................................................................................................................................................................................................................................... 26 at 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TGGGAGGCAGAGGCAGGTGAATTTCTGT................................................................................................................................................................................................................................................................................................ 28 13 0.54 0.54 0.08 0.38 - - - - - - - - - - - - - - - - - - - - - - - - - 0.08
................................................................................................................................................................................................TTGGGAGGCAGAGGCAGGTGAATTTCTGT................................................................................................................................................................................................................................................................................................ 29 12 0.08 0.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.08

Antisense strand
TACCCTACTGAGTACAACATCTTCCCACGCACCTGGTGCCTCCCTGCGGAGTGAGTGAGCTCAGACCCATGGACACGATGAGGAGTCACTCTCTGTGCTCTTAATGACCCAGATGTGTTTCAGAGGGCTGGAATGGGTCCAAGAAAGATTCAGCTGGCTGGGAGTGGTGGCTCAGACTTTTAATCCCAGTACTTGGGAGGCAGAGGCAGGTGAATTTCTGTAAATCTGAGACCAGTCTGGATTACATAGCAAGTACAGGATAGCCAGGGTTATAGAGACTTTCTCAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGTTCAGCTGCCCAAGCAAAGTGGGTCCAGAGCTAAGTGCTCCAGGAAGAACCTGGAGGTAGATAACAAGAAGGTGGCCATGGGGATCCCAGGACAGGCAAGGATGCACAGAAACCCTTTGACCAGCCTCTCTCTGCACGTAGCTATGGGGACTTCCAGGCCTACGGTCGTCAGCGGAAAACCCGCACTTATA
..............................................................................................................................................................................................................(((((...(((((....(((((.....((((((((((.(((.((.......((....)).((((......((((((((............................)))))))).....))))..))...))))))))))).)).....(((((((.....))))))).)))))....)))))...))).))...............................................................................................................
.............................................................................................................................................................................................................206...............................................................................................................................................................................................400...........................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR037903(GSM510439)
testes_rep4. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
..................................................................................................................................................................................................GAGGCAGAGGCAGGTGAATTTCTGga................................................................................................................................................................................................................................................................................................. 26 ga 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................GCTGCCCAAGCAAAagct............................................................................................................................................................................. 18 agct 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.....................................................................................................................................................................................................................ATTTCTGTAAATCTGAGACCAGTCTGGA............................................................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................GGGAGGCAGAGGCAGGTGAATTTCTGctt................................................................................................................................................................................................................................................................................................. 29 ctt 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTCAGCGGAAtgag.............. 18 tgag 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -