| Gene: 5730590G19Rik | ID: uc009hyp.1_intron_20_0_chr7_86840947_f.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| ACTGCTGTTCCAAGGAAGAACGCCCTCCTCTCATAGCACGGACACCAGAGGTAATCTGCCTGCTACCAGGGCTGAGCTCTCCTGTGGGTGACTTGCAGAATTCTCTTGAGTACAGAATGTGGGAAGATGTTTTTGACCTTGCAGTGTCATGTGCTCTTCCTAAAGAGGCTTCATTGTAGAACTTAGGGCATCTGAAGAGAAACCTGCAAAATCTCACCTATTTCGGGTGATGGAAGTGGTGTGTACACCA .....................................................................................................(((((((((((((((.((..((.(((....)))...))..))...)).))))))).((((((....((......)).....))))))......)))))).................................................. ..................................................................................................99...................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................TCTTGAGTACAGAATGTGGGAAGATGT........................................................................................................................ | 27 | 1 | 25.00 | 25.00 | 13.00 | 8.00 | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TGAGTACAGAATGTGGGAAGATGTTT...................................................................................................................... | 26 | 1 | 18.00 | 18.00 | 11.00 | 4.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTGTAGAACTTAGGGCATCTGAAGAG................................................... | 26 | 1 | 18.00 | 18.00 | 3.00 | 8.00 | 3.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TCTTGAGTACAGAATGTGGGAAGATGTT....................................................................................................................... | 28 | 1 | 11.00 | 11.00 | 2.00 | 7.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TGAGTACAGAATGTGGGAAGATGTT....................................................................................................................... | 25 | 1 | 10.00 | 10.00 | 2.00 | 5.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TCATAGCACGGACACCAGAGGTAATC.................................................................................................................................................................................................. | 26 | 1 | 8.00 | 8.00 | 1.00 | 2.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTGTAGAACTTAGGGCATCTGAAGAGA.................................................. | 27 | 1 | 8.00 | 8.00 | 2.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TGCTGTTCCAAGGAAGAACGCCCTCCTC............................................................................................................................................................................................................................ | 28 | 1 | 8.00 | 8.00 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................TAAAGAGGCTTCATTGTAGAACTTAGG............................................................... | 27 | 1 | 7.00 | 7.00 | - | - | - | - | 6.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TCTTGAGTACAGAATGTGGGAAGATG......................................................................................................................... | 26 | 1 | 6.00 | 6.00 | 2.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TGAGTACAGAATGTGGGAAGATGTTTT..................................................................................................................... | 27 | 1 | 5.00 | 5.00 | 1.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................................................................TGTAGAACTTAGGGCATCTGAAGAGA.................................................. | 26 | 1 | 4.00 | 4.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TAGAACTTAGGGCATCTGAAGAGAAA................................................ | 26 | 1 | 4.00 | 4.00 | 1.00 | - | - | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................TCATAGCACGGACACCAGAGGTAATCT................................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TTCATTGTAGAACTTAGGGCATCTGAA...................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TAGAACTTAGGGCATCTGAAGAGAAACC.............................................. | 28 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TTGAGTACAGAATGTGGGAAGATGTT....................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TAAAGAGGCTTCATTGTAGAACTTAGGGC............................................................. | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................GTGGGTGACTTGCAGAATTCTCTTGA............................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TAAAGAGGCTTCATTGTAGAACTTAG................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TATTTCGGGTGATGGAAGTGGTGTG....... | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....TGTTCCAAGGAAGAACGCCCTCCaaat.......................................................................................................................................................................................................................... | 27 | aaat | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTGTAGAACTTAGGGCATCTGAAGA.................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TGAGTACAGAATGTGGGAAGATGTTTTT.................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................TCTCCTGTGGGTGACTTGCAGAATTCT.................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TCCTAAAGAGGCTTCATTGTAGAACTT.................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TAAAGAGGCTTCATTGTAGAACTTAGagc............................................................. | 29 | agc | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................AGGCTTCATTGTAGAACTTAGGGCATCTGAAG..................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..TGCTGTTCCAAGGAAGAACGCCCTCCTCT........................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................ATTGTAGAACTTAGGGCATCTGAAGA.................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TCATAGCACGGACACCAGAGGTAATCTGCC.............................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................CTTGCAGAATTCTCTTGAGTACAGAATGT.................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TGCAGTGTCATGTGCTCTTCCTAAAGt.................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................TTCTCTTGAGTACAGAATGTGGGAAG............................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TCTGAAGAGAAACCTGCAAAATCTCACC................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................CAGAATTCTCTTGAGTACAGAATGTGG................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TAGAACTTAGGGCATCTGAAGAGAAt................................................ | 26 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................AAGAGGCTTCATTGTAGAACTTAGGG.............................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTGTAGAACTTAGGGCATCTGAAGAGAA................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TCTCATAGCACGGACACCAGAGGTAATC.................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TACAGAATGTGGGAAGATGTTTTTGACC................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TCATAGCACGGACACCAGAGGTAA.................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TCCTAAAGAGGCTTCATTGTAGAACac.................................................................. | 27 | ac | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................TTTTGACCTTGCAGTGTCATGTGCTC.............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TGACTTGCAGAATTCTCTTGAGTACAG....................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................ATTTCGGGTGATGGAAGTGGTGTGTA..... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGTAGAACTTAGGGCATCTGAAGAG................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TAAAGAGGCTTCATTGTAGAACTTAGGt.............................................................. | 28 | t | 1.00 | 7.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................AGGGCATCTGAAGAGAAACCTGCAAAATCTCA.................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................TCATTGTAGAACTTAGGGCATCTGAAG..................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTGTAGAACTTAGGGCATCTGAAtag................................................... | 26 | tag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................TAAAGAGGCTTCATTGTAGAACTTAGGG.............................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TAGAACTTAGGGCATCTGAAGAGAAAt............................................... | 27 | t | 1.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................GGCTTCATTGTAGAACTTAGGGCATC.......................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................GGCTTCATTGTAGAACTTAGGGCATCTG........................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TTTCGGGTGATGGAAGTGGTGTGTAC.... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTAATCTGCCTGCTACCAGGGCTGA............................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TCTCACCTATTTCGGGTGATGGAAGTG............ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AAAGAGGCTTCATTGTAGAACTTAGG............................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TTTCGGGTGATGGAAGTGGTGTGTAt.... | 26 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TTCATTGTAGAACTTAGGGCATCTGAAG..................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................CTTGAGTACAGAATGTGGGAAGATGT........................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TACCAGGGCTGAGCTCTCCTGTGGGTGA............................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................GGCTTCATTGTAGAACTTAGGGCATCTGA....................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TACCAGGGCTGAGCTCTCCTGTGGGTG................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ACTGCTGTTCCAAGGAAGAACGCCCTCCTCTCATAGCACGGACACCAGAGGTAATCTGCCTGCTACCAGGGCTGAGCTCTCCTGTGGGTGACTTGCAGAATTCTCTTGAGTACAGAATGTGGGAAGATGTTTTTGACCTTGCAGTGTCATGTGCTCTTCCTAAAGAGGCTTCATTGTAGAACTTAGGGCATCTGAAGAGAAACCTGCAAAATCTCACCTATTTCGGGTGATGGAAGTGGTGTGTACACCA .....................................................................................................(((((((((((((((.((..((.(((....)))...))..))...)).))))))).((((((....((......)).....))))))......)))))).................................................. ..................................................................................................99...................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................CACCAGAGGTAATCTGCCTGCTACCA...................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................GGGTGACTTGCAGAATTCTCTTGAGTA.......................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................ACTTGCAGAATTCTCTTGAGTACAtacc........................................................................................................................................ | 28 | tacc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............AGGAAGAACGCCCTCCTCTCATAGCA.................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................GTGACTTGCAGAATTCTCTTGAGTACAa........................................................................................................................................ | 28 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................ACCTTGCAGTGTCATGTGCTCTTCCTA........................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................ACACCAGAGGTAATCTGCCTGCTACCA...................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| CTGTTCCAAGGAAgacg......................................................................................................................................................................................................................................... | 17 | gacg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |