| Gene: Ube3a | ID: uc009hei.1_intron_11_0_chr7_66559182_f.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(3) PIWI.ip |
(8) TESTES |
| CTAGGAAAATTGAAGATGATTATAGCCAAAAATGGCCCAGACACAGAAAGGTAATATCAAACTCCAACTTTGTACCCACTGTAAACCTTTTCACCATATTCCATACACGCAAGCAGAGCCAACATGTAGCCTCTATATACTCTTCTGATGTTATATTGAAATATCTAAGTCAGCAAACACTAGTGGAATGGATATTTTCCCTTCATGATTTGAGGAATTTTTTTAAAAATTAGTGTAGTTAAAAAGTAAT ......................................................................................................(((.(((..((.((((.....((((((...)))))).)))).))..))))))...((((((((((..((.((........)).)).)))))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ...........................................................................CCACTGTAAACCTTTTCACCATATTCCATACACGCAAGCAGAGCCAACATGT........................................................................................................................... | 52 | 1 | 33.00 | 33.00 | 33.00 | - | - | - | - | - | - | - |
| .TAGGAAAATTGAAGATGATTATAGCCA.............................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - |
| ...GGAAAATTGAAGATGATTATAG................................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - |
| .....AAAATTGAAGATGATTATAGCCA.............................................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................TTTCCCTTCATGATcctc..................................... | 18 | cctc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 |
| CTAGGAAAATTGAAGATGATTATAGCCAAAAATGGCCCAGACACAGAAAGGTAATATCAAACTCCAACTTTGTACCCACTGTAAACCTTTTCACCATATTCCATACACGCAAGCAGAGCCAACATGTAGCCTCTATATACTCTTCTGATGTTATATTGAAATATCTAAGTCAGCAAACACTAGTGGAATGGATATTTTCCCTTCATGATTTGAGGAATTTTTTTAAAAATTAGTGTAGTTAAAAAGTAAT ......................................................................................................(((.(((..((.((((.....((((((...)))))).)))).))..))))))...((((((((((..((.((........)).)).)))))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| .....................CCAAAAATGGCCCAtaag................................................................................................................................................................................................................... | 18 | taag | 7.00 | 0.00 | - | 6.00 | - | - | 1.00 | - | - | - |