| Gene: Saa1 | ID: uc009gza.1_intron_2_0_chr7_53997897_r | SPECIES: mm9 |
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(2) OTHER.mut |
(13) TESTES |
| CTCCTCTCACCTACACCCATAGATCACCAGATCTGCCCAGGAGACACCAGGTGAGAGGCAGATCCGGGCACAGAAACTGATTGATTGCTGTGTTTCCTCTCAGTGGAACCTCCTGGCTTCTGCTCACTTGTGGGGTTTGTGCCAGGCTGAGGAGACACATGGGAAATGCTTCCTACTGAATCAGGGGCTCCTGGAGGAAGTGGCGACCTGGGTGGTCCCTGCCCTCCAGACCCCTCTCTACTGCCTGCCTGCCTTCTTAGACAGAGGTAGTTGAGCAGGCAGGATGGATGGATGAGAACTGAGCAGCCTTGTGGCTCTGATGGGGGGAGGTCCTGCTGAGAGGTCTCAGGAGGCACTGCTAGGACACACATGAATAGCAGTAAGGAGAAATGAGCAGGGCCTGTGTGGATGAGAGGCCAAGGGGGAGGCACCAGTCTGTGAGGGTCTCCTCCAGCCTCTCCTCTCACCCCAGCAGGATGAAGCTACTCACCAGCCTGGTCTTCTGCTCCCTGCTCCTGGGAG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................................................................................TGGATGGATGAGAACggc............................................................................................................................................................................................................................ | 18 | ggc | 7.00 | 0.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................TGAATAGCAGTAAGGAGAAATGAGCA.............................................................................................................................. | 26 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................TAGGACACACATGAATAGCAGTAAGG......................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................GATGGATGAGAACTGAGCAG........................................................................................................................................................................................................................ | 20 | 2 | 3.50 | 3.50 | - | 3.50 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCACCAGTCTGTGAG................................................................................ | 18 | 2 | 3.50 | 3.50 | - | 3.50 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAGGGCCTGTGTG................................................................................................................... | 17 | 2 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................GATGGATGGATGAGAACTGAGCAGCCT..................................................................................................................................................................................................................... | 27 | 2 | 2.50 | 2.50 | 2.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................CTCACTTGTGGGGTTTGTGCCAGGCTG..................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 2 | 2.50 | 2.50 | - | 2.50 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................GGATGGATGGATGAGAACTGAGCAGC....................................................................................................................................................................................................................... | 26 | 2 | 2.50 | 2.50 | - | 2.50 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................TAGGACACACATGAATAGCAGTAAGGAG....................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCTGGTCTTCTGCTtgt............ | 20 | tgt | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................GCAGGGCCTGTGTGGATGAGAGG.......................................................................................................... | 23 | 2 | 1.50 | 1.50 | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TCAGTGGAACCTCCTGGCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................. | 21 | 2 | 1.50 | 1.50 | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................CAGAGGTAGTTGAGCAGGCAGGATGGATGGA...................................................................................................................................................................................................................................... | 31 | 2 | 1.50 | 1.50 | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................ATGGATGGATGAGAACTGAGCAG........................................................................................................................................................................................................................ | 23 | 2 | 1.50 | 1.50 | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................AGGCACTGCTAGGACACAC......................................................................................................................................................... | 19 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................TGGCTTCTGCTCACTTGgatt.................................................................................................................................................................................................................................................................................................................................................................................................... | 21 | gatt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................TAGGACACACATGAATAGCAGTAAGGA........................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................CACTTGTGGGGTTTGTGCCAGGC....................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ............................................................GATCCGGGCACAGAAACTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................CAGGGGCTCCTGGAGGAAGTGG............................................................................................................................................................................................................................................................................................................................... | 22 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TGTGGCTCTGATGGGGGGAGGTCCTG........................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ...............................................................CCGGGCACAGAAACTGATTGATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................GATGGATGGATGAGAACTGAGCAGCC...................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ........................................................................................................................................................................................................................................................................AGGTAGTTGAGCAGGCAGGAT............................................................................................................................................................................................................................................. | 21 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................GAGGCACTGCTAGGACAC........................................................................................................................................................... | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................CAGGAGGCACTGCTAGG............................................................................................................................................................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ............................................................................................................................................................................................................................................................................................................................................................GGAGGCACTGCTAGG............................................................................................................................................................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| CTCCTCTCACCTACACCCATAGATCACCAGATCTGCCCAGGAGACACCAGGTGAGAGGCAGATCCGGGCACAGAAACTGATTGATTGCTGTGTTTCCTCTCAGTGGAACCTCCTGGCTTCTGCTCACTTGTGGGGTTTGTGCCAGGCTGAGGAGACACATGGGAAATGCTTCCTACTGAATCAGGGGCTCCTGGAGGAAGTGGCGACCTGGGTGGTCCCTGCCCTCCAGACCCCTCTCTACTGCCTGCCTGCCTTCTTAGACAGAGGTAGTTGAGCAGGCAGGATGGATGGATGAGAACTGAGCAGCCTTGTGGCTCTGATGGGGGGAGGTCCTGCTGAGAGGTCTCAGGAGGCACTGCTAGGACACACATGAATAGCAGTAAGGAGAAATGAGCAGGGCCTGTGTGGATGAGAGGCCAAGGGGGAGGCACCAGTCTGTGAGGGTCTCCTCCAGCCTCTCCTCTCACCCCAGCAGGATGAAGCTACTCACCAGCCTGGTCTTCTGCTCCCTGCTCCTGGGAG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................CCCAGGAGACACCAGaag........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 18 | aag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |