| Gene: Abcc6 | ID: uc009gya.1_intron_8_0_chr7_53242012_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(14) TESTES |
| CCTAAATCTAGAATATTCCTTTATTGTACATATGAAACTCATATTTCTAAATAAGGTTGTATTTAGAGGTAGAGGTAGGTTTGAGTTTGGGGAGACACTATTCCCCCTCCGGCAGTGCATCTATCACATCACGGTCATCTGGGTGCTGGGAGACCCGCCCCAGCCCAGCAGTGGCTTCCACCCCAACTCTCCCTCTGCAGCCATCGGACTGTTTGCCTCCATGGCTGCGGTGTTCCTGGGTGGAGCCCGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................TAAGGTTGTATTTAGAGGTAGAGGT.............................................................................................................................................................................. | 25 | 1 | 7.00 | 7.00 | 2.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................CCCAGCAGTGGCTTCCACCCCAACTC............................................................. | 26 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................AATAAGGTTGTATTTAGAGGTAGAGGT.............................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TCCCCCTCCGGCAGTGCATCTATCACA.......................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - |
| ...............................................TAAATAAGGTTGTATTTAGAGGTAGA................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TAAATAAGGTTGTATTTAGAGGTAGAGG............................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................TTAGAGGTAGAGGTAGGTTTGAGTT................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................ATCGGACTGTTTGCCTCCATGGCTGCGG.................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................TAAGGTTGTATTTAGAGGTAGAGGTA............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................ATAAGGTTGTATTTAGAGGTAGAGGT.............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TCTAGAATATTCCTTTATTGTACAaat......................................................................................................................................................................................................................... | 27 | aat | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TTCCCCCTCCGGCAGTGCATCTATCA............................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TATTTAGAGGTAGAGGTAGGTTTGAGT.................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................................................................................TCGGACTGTTTGCCTCCATGGCTGCGGTG.................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................TATTTCTAAATAAGGTTGTATTTAGAGG..................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................TAAGGTTGTATTTAGAGGTAGAGGTAGG........................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................TTAGAGGTAGAGGTAGGTTTGAGTTT.................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................CGGACTGTTTGCCTCCATGGCTGCGGTGT................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| CCTAAATCTAGAATATTCCTTTATTGTACATATGAAACTCATATTTCTAAATAAGGTTGTATTTAGAGGTAGAGGTAGGTTTGAGTTTGGGGAGACACTATTCCCCCTCCGGCAGTGCATCTATCACATCACGGTCATCTGGGTGCTGGGAGACCCGCCCCAGCCCAGCAGTGGCTTCCACCCCAACTCTCCCTCTGCAGCCATCGGACTGTTTGCCTCCATGGCTGCGGTGTTCCTGGGTGGAGCCCGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................CCATCGGACTGTTTtcaa.................................... | 18 | tcaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................CCCCCTCCGGCAGTGCATCTAggtg............................................................................................................................... | 25 | ggtg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................CTCTGCAGCCATCGGAC......................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |