| Gene: Slc17a7 | ID: uc009gtx.1_intron_2_0_chr7_52425306_f | SPECIES: mm9 |
|
|
(5) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| GTCACTCAGATTCCTGGAGGATTTATCTGCCAAAAATTCGCAGCCAACAGGTACCGTTGTAGTGTCTCAAGGTGGCAGAAATTGGAGTTGTGTGTGGTGGAGCTAGAGGGTGTGGCCTTGGGTTTGGCTCTGGGAAATTGGGAGGGTCCTTGTTTGAGGGCATATCTTGGAGGCAGCCTCTAGTTCTGTTATACACAGGGCCTGATGTAGGCAGGGAGGGGAAAATCCTAGGAGCAGCGGGAAGGCTGGATGGCTAGCGCCACACGAACACCTCACTATAACTGGCATGGCTAGACTCTTTTTTTCCCCCACCTTTCTCAACAGGGTCTTTGGCTTTGCCATTGTGGCTACCTCCACCCTAAACATGTTGATCC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................TACCGTTGTAGTGTCTCAAGGTGGCAG........................................................................................................................................................................................................................................................................................................ | 27 | 1 | 11.00 | 11.00 | - | 10.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................TACCGTTGTAGTGTCTCAAGGTGGCA......................................................................................................................................................................................................................................................................................................... | 26 | 1 | 7.00 | 7.00 | - | - | - | - | - | 6.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................TACCGTTGTAGTGTCTCAAGGTGGC.......................................................................................................................................................................................................................................................................................................... | 25 | 1 | 6.00 | 6.00 | - | - | - | 5.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TAGGAGCAGCGGGAAGGCTGGATG.......................................................................................................................... | 24 | 1 | 6.00 | 6.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | 2.00 | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................TACACAGGGCCTGATGTAGGCAGGGAGG........................................................................................................................................................... | 28 | 1 | 5.00 | 5.00 | - | - | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TAGGAGCAGCGGGAAGGCTGGATGGC........................................................................................................................ | 26 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGGGTTTGGCTCTGGGAAATTGGGAGG..................................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................................TACACAGGGCCTGATGTAGGCAGGGAG............................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................GGTACCGTTGTAGTGTCTCAAGGTGGC.......................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................GAACACCTCACTATAACTGGCATGGCTAG................................................................................ | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTATACACAGGGCCTGATGTAGGCAGGGA............................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGTAGTGTCTCAAGGTGGCAGA....................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TTGTAGTGTCTCAAGGTGGCAGAAATTGG................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGTAGTGTCTCAAGGTGGCAGAcaa.................................................................................................................................................................................................................................................................................................... | 25 | caa | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................CAGCCTCTAGTTCTGTT........................................................................................................................................................................................ | 17 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................GGCAGAAATTGGAGTTGTGTGTG...................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGGGTTTGGCTCTGGGAAATTGG......................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGATGTAGGCAGGGAaagt......................................................................................................................................................... | 19 | aagt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................TAGTGTCTCAAGGTGGCAGAAATTGG................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................AACAGGGTCTTTGGCTTTGCCATTGTGt........................... | 28 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTACCGTTGTAGTGTCTCAAGGTGGCA......................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................GTAGTGTCTCAAGGTGGCAGAAATTGG................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................GTGTCTCAAGGTGGCAGAAATTGGA................................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TACACAGGGCCTGATGTAGGCAGGGAa............................................................................................................................................................ | 27 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TGTTTGAGGGCATATCTTGGAGGCA....................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TCCTAGGAGCAGCGGGAAGGCTGGA............................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................................................................................TAGGAGCAGCGGGAAGGCTGGATGGCTA...................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GTCACTCAGATTCCTGGAGGATTTATCTGCCAAAAATTCGCAGCCAACAGGTACCGTTGTAGTGTCTCAAGGTGGCAGAAATTGGAGTTGTGTGTGGTGGAGCTAGAGGGTGTGGCCTTGGGTTTGGCTCTGGGAAATTGGGAGGGTCCTTGTTTGAGGGCATATCTTGGAGGCAGCCTCTAGTTCTGTTATACACAGGGCCTGATGTAGGCAGGGAGGGGAAAATCCTAGGAGCAGCGGGAAGGCTGGATGGCTAGCGCCACACGAACACCTCACTATAACTGGCATGGCTAGACTCTTTTTTTCCCCCACCTTTCTCAACAGGGTCTTTGGCTTTGCCATTGTGGCTACCTCCACCCTAAACATGTTGATCC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................................................................................................GATGGCTAGCGCCACACGAACACCTCACTA................................................................................................ | 30 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................AGGAGCAGCGGGAAGGCTGGATGGCTA...................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................CCACACGAACACCTCACTATAACTGGC........................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................CCAAAAATTCGCAGCCAACAGGTACCGT............................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................GCGCCACACGAACACCTCACTA................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................CCACACGAACACCtggt...................................................................................................... | 17 | tggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................ATTCGCAGCCAACAGGTACCGTTGTA......................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................GCGCCACACGAACACCTCACTATAA............................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................CTCAACAGGGTCTTcttt............................................ | 18 | cttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................CTAGCGCCACACGAACACCTCACTA................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................CTCAACAGGGTCTTca............................................ | 16 | ca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...ACTCAGATTCCTGGAGGATTTATCTGCCA...................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................CTCAACAGGGTCTTTc........................................... | 16 | c | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................GGCTACCTCCACCCTgga.............. | 18 | gga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................CCCACCTTTCTCAACAGG................................................. | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................GCCAAAAATTCGCAGCCAACAGGTA................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................TCTCAACAGGGTCTTttg............................................ | 18 | ttg | 0.10 | 0.00 | - | - | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................TCTCAACAGGGTCTT............................................ | 15 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | 0.10 | - | - | - | - | - | - | - | - | - | - | - |