(8)
OTHER.mut
(3)
OVARY
(2)
PIWI.ip
(1)
PIWI.mut
(1)
TDRD1.ip
(25)
TESTES

Sense strand
TCACGACGCTGGAGTACGGACCGGTGCCGGAGAGCCACGCATGCGCACTGGTGAGGGCTTGCCCCGCGGCCGCTGCTGCCTCCGAGTCCTCTCGGCCGCTTGGGGCGCGCGGGCTCCCGTCATCCACTGCGGCCTTCTCGGAAGCCCCGCCCCTCTGAGCGCGTGATTTCCCCTACAGTGCGGAAGCCTGGGCTGGGCGGCTGGCGGTGGGCGGCGATGGTTGTCCTCGCGGTTTTCGTTTACGGTCCCG


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesWT1()
Testes Data. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR037897(GSM510433)
ovary_rep2. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
................................................................................................................................................................................AGTGCGGAAGCCTGGGCTG....................................................... 19 1 10.00 10.00 10.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................CCTGGGCTGGGCGGCTGGCGGT.......................................... 22 1 7.00 7.00 7.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................CTGGGCTGGGCGGCTGGCGGT.......................................... 21 1 5.00 5.00 5.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................TGGGCTGGGCGGCTGGCGGTGGGCGG.................................... 26 1 5.00 5.00 5.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................CTGGGCTGGGCGGCTGGCG............................................ 19 1 4.00 4.00 4.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................CCTGGGCTGGGCGGCTGGCGGTG......................................... 23 1 4.00 4.00 4.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TGGGCGGCTGGCGGTGGGCGGCGATGGT............................. 28 1 3.00 3.00 - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................TCTGAGCGCGTGATTTCCCCTACA......................................................................... 24 1 3.00 3.00 - - - - - 2.00 - - - - - - - - - - - - - - - - - 1.00 - - - -
.........................................................................................................................................................TCTGAGCGCGTGATTTCCCCTACAGT....................................................................... 26 1 2.00 2.00 - - - - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................TTGTCCTCGCGGTTTTCGTTTACGGTC... 27 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................GTGGGCGGCGATGGTTGTCCTCGCGG.................. 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................................................................................TACAGTGCGGAAGCCTGGGCTGGGCGGt................................................. 28 t 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.........................................................................................................................................................................................................................TGGTTGTCCTCGCGGTTTTCGTTTACGttc... 30 ttc 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................AGCCTGGGCTGGGCGGCTG............................................... 19 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................GGAAGCCTGGGCTGGGCGGCT................................................ 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...........................................................................................................................................................................................CTGGGCTGGGCGGCTGGCGG........................................... 20 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................GCGGAAGCCTGGGCTGGGCGG.................................................. 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
.....................................................................CCGCTGCTGCCTCCcgt.................................................................................................................................................................... 17 cgt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........TGGAGTACGGACCGGTGCCGGAGAGt....................................................................................................................................................................................................................... 26 t 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................GCGGCTGGCGGTGGGCGG.................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..........................................................................................................................................................................CCCTACAGTGCGGAAGCCTGGG.......................................................... 22 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................GCGGAAGCCTGGGCTGGGCGGCT................................................ 23 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................................................................................................................................................................AGTGCGGAAGCCTGGGCTGGGCG................................................... 23 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................CCCTACAGTGCGGAAGCCTGGGCTGGGgggg................................................. 31 gggg 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................TGGTTGTCCTCGCGGTTT............... 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..........................................................................................................................................................................................CCTGGGCTGGGCGGCTGGCGG........................................... 21 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................................................GTGCGGAAGCCTGGGCTGGGCGGCTGGCGGT.......................................... 31 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................ATGGTTGTCCTCGCGGTTT............... 19 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................GGCGATGGTTGTCCaagt.................... 18 aagt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................TGGTTGTCCTCGCGGTTTTCGTTTA........ 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.........TGGAGTACGGACCGGTGCCGGAGAGC....................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..........................................................................................................................................................................................CCTGGGCTGGGCGGCTGGCG............................................ 20 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................CTGGGCGGCTGGCGGTGGGCaga................................... 23 aga 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................GCGATGGTTGTCCTCGCG................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
.........................................................................................................................................................................................GCCTGGGCTGGGCGGCTGGCG............................................ 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
............................................................................................................................................................................................TGGGCTGGGCGGCTG............................................... 15 5 0.20 0.20 - - - - - - - - - - - 0.20 - - - - - - - - - - - - - - - -

Antisense strand
TCACGACGCTGGAGTACGGACCGGTGCCGGAGAGCCACGCATGCGCACTGGTGAGGGCTTGCCCCGCGGCCGCTGCTGCCTCCGAGTCCTCTCGGCCGCTTGGGGCGCGCGGGCTCCCGTCATCCACTGCGGCCTTCTCGGAAGCCCCGCCCCTCTGAGCGCGTGATTTCCCCTACAGTGCGGAAGCCTGGGCTGGGCGGCTGGCGGTGGGCGGCGATGGTTGTCCTCGCGGTTTTCGTTTACGGTCCCG


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesWT1()
Testes Data. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR037897(GSM510433)
ovary_rep2. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
.....................................................................CCGCTGCTGCCTCCGAGTCCTC............................................................................................................................................................... 22 1 5.00 5.00 - - - - 2.00 3.00 - - - - - - - - - - - - - - - - - - - - - -
.........................................................................TGCTGCCTCCGAGTCCT................................................................................................................................................................ 17 1 5.00 5.00 5.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................GGCCGCTGCTGCCTCCGAGTCCTC............................................................................................................................................................... 24 1 5.00 5.00 - - - - - - 5.00 - - - - - - - - - - - - - - - - - - - - -
......................................................................................................GGGCGCGCGGGCTCCCGTCATCCACT.......................................................................................................................... 26 1 3.00 3.00 - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................CCGCTGCTGCCTCCGAGTCCTCT.............................................................................................................................................................. 23 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................GGCCGCTGCTGCCTCCGAGTCCTCTCG............................................................................................................................................................ 27 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................CTCCGAGTCCTCTCGGCCGCTT..................................................................................................................................................... 22 1 2.00 2.00 - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - -
.........................................................................TGCTGCCTCCGAGTCCTCTCGGCCG........................................................................................................................................................ 25 1 2.00 2.00 - - - - 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - -
...................ACCGGTGCCGGAGAGCCA..................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................CCGCTGCTGCCTCCGAGTCCT................................................................................................................................................................ 21 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..................................................................CGGCCGCTGCTGCCTCCGAGTCCTCTCG............................................................................................................................................................ 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................GCGGCCGCTGCTGCCTCCGAGTCCT................................................................................................................................................................ 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................CGGCCGCTGCTGCCTCCGAGTCCTCT.............................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
................................................................CGCGGCCGCTGCTGCCTCCGA..................................................................................................................................................................... 21 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.......................GTGCCGGAGAGCCACGCATGCGCACT......................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
..........................................................................GCTGCCTCCGAGTCCTCTCGGC.......................................................................................................................................................... 22 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................AGTCCTCTCGGCCGCTTG.................................................................................................................................................... 18 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................CGCTGCTGCCTCCGAGTCCTCTCGG........................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..............................................................CCGCGGCCGCTGCTGCCTCCGAGTCCa................................................................................................................................................................. 27 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................GCCACGCATGCGCACTGGTGAGG.................................................................................................................................................................................................. 23 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.................CCGGTGCCGGAGAGCCACGCAgca................................................................................................................................................................................................................. 24 gca 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................GCGGCCGCTGCTGCCTCCGAGTCCTCTC............................................................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
......................................................................CGCTGCTGCCTCCGAGTCCT................................................................................................................................................................ 20 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
............................GGAGAGCCACGCATGCGCACTGGTGA.................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.........................................................................TGCTGCCTCCGAGTCCTC............................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.....................................................................CGCTGCTGCCTCCGAGTCCTCTt.............................................................................................................................................................. 23 t 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................................TGCCTCCGAGTCCTCTC............................................................................................................................................................. 17 2 0.50 0.50 - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................CTGCCTCCGAGTCCTC............................................................................................................................................................... 16 4 0.25 0.25 - - - - - - - - - - - - - - - 0.25 - - - - - - - - - - - -
............................................................................TGCCTCCGAGTCCTC............................................................................................................................................................... 15 5 0.20 0.20 - - - - - - - - - 0.20 - - - - - - - - - - - - - - - - - -