| Gene: Fcgrt | ID: uc009gtd.1_intron_0_0_chr7_52348726_r | SPECIES: mm9 |
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(7) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(2) PIWI.mut |
(24) TESTES |
| CATCGCAGGCGGTGTGCTGTTGTGGGGCAGGATGCGCAGCGGTCTGCCAGGTATATGCAGGATGGGGGAGGGGCGGGGCCGTGTGCAGGATTGGGTGGGAGTGGCCTTGTGCAGGATGAGGGAGGGGCGGGGCCGTGTGCAGGATTGGGGTGGGGCGTGGCCGTGTGCAGAATGAGGGAGGGGCGTGGCCGTGTGCAGGATTGGGGAGGGGAGGGAAGGGGCCGTGTGCAGGATTGGGGAGGGGCGTAGCTGTGTGCAGGATTGGGGAAGGGAGGGGCCGTGTGCAGGATTGGGGGTCGTGGCAGGAAGTAGCGACTCAGAAAGAAAGAGGGGAGGCAGAGAGATAATAGAGACAAAAGAGTCCCTGACCACCCTGGGAAAAGAGATGGGAACAGAGACCATAGCGTGACCCTGTCAGGTGTGTTGGGTGGGTGAGACCTTAGATACTTGTGCTGACCTCTGTTCCTCTCTCTCAGCCCCATGGCTTTCTCTCAGCGGCGATGACTCTGGTGACCTGTTGCCTGGT .....................................................................................................................................................................................................................................................((..((((...((...((.....((((.((.(((..........((..(((((((.((.....)).)))))))...))...........)))..........(((.(((......))).))).)).)))).....))....))...))))..))............................................................................................................................... .................................................................................................................................................................................................................................................242...............................................................................................................................................................404........................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATACTTGTGCTGACCTCTGTTCC............................................................ | 26 | 1 | 20.00 | 20.00 | 1.00 | - | - | - | 17.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TGGCAGGAAGTAGCGACTCAGAAAGA......................................................................................................................................................................................................... | 26 | 1 | 7.00 | 7.00 | - | 1.00 | 1.00 | 3.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TAGCGACTCAGAAAGAAAGAGGGGAGGC............................................................................................................................................................................................. | 28 | 1 | 7.00 | 7.00 | - | - | 1.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................TGGGAAAAGAGATGGGAACAGAGACC.............................................................................................................................. | 26 | 1 | 6.00 | 6.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | 1.00 | 1.00 |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGGTGTGTTGGGTGGGTGAGAC........................................................................................ | 26 | 1 | 5.00 | 5.00 | - | - | - | 3.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGTGACCCTGTCAGGTGTGTTGGG.................................................................................................. | 27 | 1 | 4.00 | 4.00 | - | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGTGACCCTGTCAGGTGTGTTGGGT................................................................................................. | 28 | 1 | 4.00 | 4.00 | - | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCGGCGATGACTCTGGTGACCTGT........ | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................TGGGAAAAGAGATGGGAACAGAGACCAT............................................................................................................................ | 28 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGGTGTGTTGGGTGGGTGAGA......................................................................................... | 25 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................GAAGTAGCGACTCAGAAAGAAAGAGG................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGGTGTGTTGGGTGG............................................................................................... | 19 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCGGCGATGACTCTGGTGACC........... | 24 | 1 | 3.00 | 3.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................GAGGGGCGTAGCTGTGTGCAGGATTGGGGA.................................................................................................................................................................................................................................................................. | 30 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TGCTGTTGTGGGGCAGGATGCGCAGa...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | a | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TGGCAGGAAGTAGCGACTCAGAAAGAA........................................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATACTTGTGCTGACCTCTGTTC............................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTCCTCTCTCTCAGCCCCATGG.......................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGTGACCCTGTCAGGTGTGTTGGGTa................................................................................................ | 29 | a | 2.00 | 4.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......GGCGGTGTGCTGTTGTGGGGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................CAGGAAGTAGCGACTCAGAAAGAAAGA..................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTTCTCTCAGCGGCGATGACTC................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGCGGCGATGACTCTGGTGA............. | 24 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGCGGCGATGACTCTGGTGACC........... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCGGCGATGACTCTGGTGACCTG......... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATACTTGTGCTGACCTCTGTTC............................................................. | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGTGACCCTGTCAGGTGTGTTG.................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TAGCTGTGTGCAGGATTGGGGAAGGG.............................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................AGGGGAGGGAAGGGGggac............................................................................................................................................................................................................................................................................................................. | 19 | ggac | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGCGATGACTCTGGTGACC........... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTTAGATACTTGTGCTGACCTC.................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................GTAGCGACTCAGAAAGAAAGAGGGGA................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TAGCGACTCAGAAAGAAAGAGG................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGACCTCTGTTCCTCTCTCTCAGC................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................GAGGCAGAGAGATAATAGAGACAAA......................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................TGCAGGATTGGGTGGGAGTGGCCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................CGACTCAGAAAGAAAGAGGGGAGGCAGA.......................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTCAGCGGCGATGACTCTGGTG.............. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGGCGATGACTCTGGTGACCT.......... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TGTGCAGAATGAGGGAGGGGCGTGGCC................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTCTCAGCGGCGATGACTCTGG................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................GAGGGAGGGGCGGGGCCGct..................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | ct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGGTGTGTTGGGTGGGTGAGACC....................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGTGCTGTTGTGGGGCAGGATGCGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TAGCGACTCAGAAAGAAAGAGGGGAGG.............................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGGTGTGTTGGGTGGGTGAGACa....................................................................................... | 26 | a | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TAGCGACTCAGAAAGAAAGAGGGGAG............................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................TTGGGGGTCGTGGCAGGAAGTAGCGA................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................GAGAGATAATAGAGACAAAAGAGTCCC................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTAGATACTTGTGCTGACCTCTGT............................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCAGCGGCGATGACTCTG................. | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TGCTGTTGTGGGGCAGGATGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTCTGGTGACCTGTTGCCTGG. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTCAGCGGCGATGACTCTGG................ | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TAGCTGTGTGCAGGATTGGGGAAGG............................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................TAGAGACAAAAGAGTCCCT................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCGGCGATGACTCTGGTGACa........... | 24 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGCGGCGATGACTCTGGTGAC............ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGGTGTGTTGGGTGGGTGAaga........................................................................................ | 26 | aga | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................AAAGAGATGGGAACAGAGACCATAGC......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTGTGCTGACCTCTGTTCCTC.......................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATACTTGTGCTGACCTCTGTTCC............................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................GATTGGGGGTCGTGGCAGGAAGTAGa..................................................................................................................................................................................................................... | 26 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TGGCAGGAAGTAGCGACTCAGA............................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................AGTAGCGACTCAGAAAGAAAGAGGGGA................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGGTGTGTTGGGTGGGTGA........................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................AGTAGCGACTCAGAAAGAAAGAGGGc................................................................................................................................................................................................. | 26 | c | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATACTTGTGCTGACCTCTGT............................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................TGACCACCCTGGGAAAAGAGATGGGAAC..................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGGGGGAGGGGCGGGtggt............................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 19 | tggt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTTCTCTCAGCGGCGATGA...................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................AGGAAGTAGCGACTCAGAAAGAAAGAGG................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGTGCTGACCTCTGTTCCTCTC........................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................TGGGAAAAGAGATGGGAACAGAGAC............................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................TGGGAAAAGAGATGGGAACAGAGACCATA........................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGACCTCTGTTCCTCTCT....................................................... | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTCTCAGCGGCGATGACTCTcg................ | 25 | cg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGGTGTGTTGGGTGGGTGAG.......................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATACTTGTGCTGA...................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CATCGCAGGCGGTGTGCTGTTGTGGGGCAGGATGCGCAGCGGTCTGCCAGGTATATGCAGGATGGGGGAGGGGCGGGGCCGTGTGCAGGATTGGGTGGGAGTGGCCTTGTGCAGGATGAGGGAGGGGCGGGGCCGTGTGCAGGATTGGGGTGGGGCGTGGCCGTGTGCAGAATGAGGGAGGGGCGTGGCCGTGTGCAGGATTGGGGAGGGGAGGGAAGGGGCCGTGTGCAGGATTGGGGAGGGGCGTAGCTGTGTGCAGGATTGGGGAAGGGAGGGGCCGTGTGCAGGATTGGGGGTCGTGGCAGGAAGTAGCGACTCAGAAAGAAAGAGGGGAGGCAGAGAGATAATAGAGACAAAAGAGTCCCTGACCACCCTGGGAAAAGAGATGGGAACAGAGACCATAGCGTGACCCTGTCAGGTGTGTTGGGTGGGTGAGACCTTAGATACTTGTGCTGACCTCTGTTCCTCTCTCTCAGCCCCATGGCTTTCTCTCAGCGGCGATGACTCTGGTGACCTGTTGCCTGGT .....................................................................................................................................................................................................................................................((..((((...((...((.....((((.((.(((..........((..(((((((.((.....)).)))))))...))...........)))..........(((.(((......))).))).)).)))).....))....))...))))..))............................................................................................................................... .................................................................................................................................................................................................................................................242...............................................................................................................................................................404........................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................GATGCGCAGCGGTCTGCCAGGTATATGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCAGCCCCATGGCTTTCTC................................... | 25 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGGTGAGACCTTAGATACTTGT........................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................CAGGATGCGCAGCGGTCTGCCAGGTAtt......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................GCTGTGTGCAGGATgcca........................................................................................................................................................................................................................................................................ | 18 | gcca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................CAGGATGCGCAGCGGTCTGCCAGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCATGGCTTTCTCTCAGCGGCGA......................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCCCATGGCTTTCTCTCAGCGGC........................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |