| Gene: AI480556 | ID: uc009gsq.1_intron_0_0_chr7_52266369_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| AAAAAAAAAAAAAAAAAAAGACTAATGTGGGCAACACCAGGAGAGCCTGACTCCAAAAACCAACCCACAAGGTAGCAGAGGATAAATGTTCCAATAGAACCTGTGCACACAGACAAATGGCCAGTCATTCTCATGGGACTCTGAAATTACGGTGTGGTTTTGTTGGTGACTTTTTTTTTTTTTTTTTTTTTTTGAGGCAGGGTCTTGTCCTGTTGCCTAGACTGGCCTGGAACTTGGGACAGTCCTGCGT ...................................................................((..(((.((((........((((((..((((.(((.((.((........)))))))...))))..))))))))))....)))..))................................................................................................ ...................................................................68........................................................................................158.......................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................TTCTCATGGGACTCTGAAATTACGGTG................................................................................................ | 27 | 1 | 6.00 | 6.00 | 3.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGGGACTCTGAAATTACGGTGTGGTT........................................................................................... | 26 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - |
| ........................................................................TAGCAGAGGATAAATGTTCCAATAGAACC..................................................................................................................................................... | 29 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................TAGAACCTGTGCACACAGACAAATGGC................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................TAGCAGAGGATAAATGTTCCAATAGAACCT.................................................................................................................................................... | 30 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............AAAAAAAGACTAATGTGGGCAACACCAG.................................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGCACACAGACAAATGGCCAatct........................................................................................................................... | 24 | atct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................TGGCCAGTCATTCTCATGGGACTCTca.......................................................................................................... | 27 | ca | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................TGGGCAACACCAGGAGAGCCTGACTC..................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTCTCATGGGACTCTGAAATTACGGTGTGGT............................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................TGTTCCAATAGAACCTGTGCACACAGAC........................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................ATTCTCATGGGACTCTGAAATTACGGT................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGAAATTACGGTGTGGTTTTGTTGGT................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................TCTCATGGGACTCTGAAATTACGGTG................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TAGAACCTGTGCACACAGACAAATGG.................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................TGAAATTACGGTtgtg............................................................................................. | 16 | tgtg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................TTCTCATGGGACTCTGAAATTACGGTGT............................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGGGACTCTGAAATTACGGTGTGGTTTTG........................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................TGGGACTCTGAAATTACGGTGTGGTTTT......................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| AAAAAAAAAAAAAAAAAAAGACTAATGTGGGCAACACCAGGAGAGCCTGACTCCAAAAACCAACCCACAAGGTAGCAGAGGATAAATGTTCCAATAGAACCTGTGCACACAGACAAATGGCCAGTCATTCTCATGGGACTCTGAAATTACGGTGTGGTTTTGTTGGTGACTTTTTTTTTTTTTTTTTTTTTTTGAGGCAGGGTCTTGTCCTGTTGCCTAGACTGGCCTGGAACTTGGGACAGTCCTGCGT ...................................................................((..(((.((((........((((((..((((.(((.((.((........)))))))...))))..))))))))))....)))..))................................................................................................ ...................................................................68........................................................................................158.......................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................TGTTGCCTAGACTtggt........................... | 17 | tggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................ACTTTTTTTTTTTTTTTTTTTTTTTGAGaatc...................................................... | 32 | aatc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |