(6)
OTHER.mut
(6)
PIWI.ip
(2)
PIWI.mut
(26)
TESTES

Sense strand
TCTGCAAGAACGGAAGACACAACCGTAGTGTGGAAGAACTTCCATGACAGGTCCCTTGGCGGGAGCAAGGGAACAAGATCTGGGCAGTGGTTCCTGGCTTAGGTGACCCCAGAGTCCTGCCAGTGGTGACTTGGCTGTGGGAATCTTTGATAAGCTACTCACCCTCTCTGATCCCTGCGTTCCCAGCAGAATGTAGCCAGCAGCATAGGAATAGCCCAGAGACGCTGAAGCGCTTGGCTCCGTTTCCCAGGCCTGACCTCTACTTCATTCTTGCTTCTCTTCTTTCCTCCCCACAGTATCACTCTCATTGTTCTGTCATCTGAGGAGGGCACCTCTGAGCTGAGGC


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT2()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
................................................................................................................................................................................................................................................................................................................TCATTGTTCTGTCATCTGAGGAGGGC................ 26 1 12.00 12.00 8.00 1.00 - - - - - - - - 1.00 - - - - - - - - 1.00 - - - 1.00 - -
.........................................................................................................................................................................................................................................................................................................................TGTCATCTGAGGAGGGCACCTCTGAGC...... 27 1 8.00 8.00 - 1.00 - 4.00 1.00 - - 2.00 - - - - - - - - - - - - - - - - - -
..............................................................................................................................TGACTTGGCTGTGGGAATCTTTGATAAG................................................................................................................................................................................................ 28 1 7.00 7.00 6.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................TAGGAATAGCCCAGAGACGCTGAAGCGC................................................................................................................. 28 1 7.00 7.00 - 3.00 - 1.00 2.00 - - - - - 1.00 - - - - - - - - - - - - - - -
..TGCAAGAACGGAAGACACAACCGTAGT............................................................................................................................................................................................................................................................................................................................. 27 1 4.00 4.00 - - 4.00 - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................CAAGATCTGGGCAGTGGTTCCTGGC........................................................................................................................................................................................................................................................ 25 1 4.00 4.00 - - - 4.00 - - - - - - - - - - - - - - - - - - - - - -
............................................TGACAGGTCCCTTGGCGGGAGCAAGG.................................................................................................................................................................................................................................................................................... 26 1 3.00 3.00 - - 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
.........................TAGTGTGGAAGAACTTCCATGACAGGTC..................................................................................................................................................................................................................................................................................................... 28 1 3.00 3.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................TCTCATTGTTCTGTCATCTGAGGAG................... 25 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................TCCCAGCAGAATGTAGCCAGCAGCATAG.......................................................................................................................................... 28 1 2.00 2.00 - - - - - - - - - - 1.00 1.00 - - - - - - - - - - - - - -
............................................TGACAGGTCCCTTGGCGGGAGCAAG..................................................................................................................................................................................................................................................................................... 25 1 2.00 2.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................CCAGTGGTGACTTGGCTGTGGGAATCTTTaaa................................................................................................................................................................................................... 32 aaa 2.00 0.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................TCTCATTGTTCTGTCATCTGAGGAGG.................. 26 1 2.00 2.00 - - - - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................TCTCATTGTTCTGTCATCTGAGGAGGGC................ 28 1 2.00 2.00 - 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................TGTCATCTGAGGAGGGCACCTCTGA........ 25 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................TCATTGTTCTGTCATCTGAGGAGG.................. 24 1 2.00 2.00 - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
............................................TGACAGGTCCCTTGGCGGGAGCAAGtg................................................................................................................................................................................................................................................................................... 27 tg 1.00 2.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................TCATTGTTCTGTCATCTGAGGAGGGCACC............. 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...................................................................................................TAGGTGACCCCAGAtaag..................................................................................................................................................................................................................................... 18 taag 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
...............................................................................................................................GACTTGGCTGTGGGAATCTTTGATAA................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................TTCTGTCATCTGAGGAGGGCACCTCTG......... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................AGCAAGGGAACAAGATCTGGGCAGT.................................................................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...................................................................................................................................TGGCTGTGGGAATCTTTGATAAGCTA............................................................................................................................................................................................. 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................TCTCTGATCCCTGCGTTCCCAGCAGAATGT........................................................................................................................................................ 30 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................TCACTCTCATTGTTCTGTCATCTGAGGA.................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...................................................................................................................................TGGCTGTGGGAATCTTTGATA.................................................................................................................................................................................................. 21 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................GAGCAAGGGAACAAGATCTGGGCAG................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.............................................................................................................................................................................................................TAGGAATAGCCCAGAGACGCTGAAGC................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................TTCTGTCATCTGAGGAGGGCACCTC........... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
........................................................................................................................................................................................................CAGCATAGGAATAGCCCAGAGACGCT........................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
................................................................................................................................................................................................................................................................................................................................TGAGGAGGGCACCTCTG......... 17 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................TGCCAGTGGTGACTTGGCTGTGGGA............................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................TCTGATCCCTGCGTTCCCAGCAGAA........................................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................TAAGCTACTCACCCTCTCTGATCCCT.......................................................................................................................................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................TGACAGGTCCCTTGGCGGGAGCAAGGa................................................................................................................................................................................................................................................................................... 27 a 1.00 3.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................TCTGTCATCTGAGGAGGGCACCTCTG......... 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
......................................................................................................................................................................TCTGATCCCTGCGTTCCCAGCAGAATGT........................................................................................................................................................ 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................AGCAAGGGAACAAGATCTGGGtagt.................................................................................................................................................................................................................................................................. 25 tagt 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................GTTCTGTCATCTGAGGAGGGCACCTCT.......... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
..TGCAAGAACGGAAGACACAACCGTA............................................................................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................GTCATCTGAGGAGGGCACCTCTGAGC...... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................TTTGATAAGCTACTCACCCTCTCTGA............................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................TAAGCTACTCACCCTCTCTGATCCCTG......................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................TCATTGTTCTGTCATCTGA....................... 19 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - -
..........................AGTGTGGAAGAACTT................................................................................................................................................................................................................................................................................................................. 15 11 0.09 0.09 - - - - - - - - - - - - - - - - 0.09 - - - - - - - - -

Antisense strand
TCTGCAAGAACGGAAGACACAACCGTAGTGTGGAAGAACTTCCATGACAGGTCCCTTGGCGGGAGCAAGGGAACAAGATCTGGGCAGTGGTTCCTGGCTTAGGTGACCCCAGAGTCCTGCCAGTGGTGACTTGGCTGTGGGAATCTTTGATAAGCTACTCACCCTCTCTGATCCCTGCGTTCCCAGCAGAATGTAGCCAGCAGCATAGGAATAGCCCAGAGACGCTGAAGCGCTTGGCTCCGTTTCCCAGGCCTGACCTCTACTTCATTCTTGCTTCTCTTCTTTCCTCCCCACAGTATCACTCTCATTGTTCTGTCATCTGAGGAGGGCACCTCTGAGCTGAGGC


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT2()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
............................................................................................................CCAGAGTCCTGCCAGTGGTGACTTG..................................................................................................................................................................................................................... 25 1 6.00 6.00 - - - - - 6.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................CTCCGTTTCCCAGGCCTGACCTCTA.................................................................................... 25 1 5.00 5.00 5.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................CTCCGTTTCCCAGGCCTGACCTCTAC................................................................................... 26 1 2.00 2.00 - - - - - - - - 2.00 - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................CCGTTTCCCAGGCCTGACCTCTACT.................................................................................. 25 1 2.00 2.00 - - - - - - - - - - - - - - - 2.00 - - - - - - - - - -
..................................................................................................................................................................................................................................................TTTCCCAGGCCTGACCTCTACTTCA............................................................................... 25 1 2.00 2.00 - - - - 1.00 - - - - - - - - - 1.00 - - - - - - - - - - -
....................................................................................................................................................................................................................................................................TACTTCATTCTTGCTTCTCTTCTTTCCT.......................................................... 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................TCCCCACAGTATCACTCTCATTGTT.................................. 25 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................CTCCGTTTCCCAGGCCTGACCTCT..................................................................................... 24 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................GTATCACTCTCATTGTTCTGTCATCTGA....................... 28 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................CTTCTTTCCTCCCCACAGTATCACTCT......................................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................................................................................................................CCTCTCTGATCCCTGCGTTCCCAag................................................................................................................................................................. 25 ag 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................TCTTTCCTCCCCACAGTATCACTCTC........................................ 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................TTTCCTCCCCACAGTATCACTCTCAT...................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................CCTCTCTGATCCCTGCGTTCCCAGCAGA............................................................................................................................................................ 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.......................................................................................TTCCTGGCTTAGGTtac.................................................................................................................................................................................................................................................. 17 tac 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..................................................................................................................................................................CCTCTCTGATCCCTGCGTTCCCAGCA.............................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
............................................................................................................................................................................................................................................GCTCCGTTTCCCAGGCCTGACCTCTA.................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -