| Gene: Pnkp | ID: uc009grf.1_intron_7_0_chr7_52115802_f | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| GTCTAAACCGAAAGCCAGTGAGTGGCATGTGGGACCATCTGCAGGAGCAGGTGAGCGCCCTCCTGCCTTTTATACTGTCTGTCCCAGCCTTCCCCTCACCACACGGGTGGCCACTGGAAATGCCTAGAGGTGCTGGGGGCACGGGGTAACCAGGTCCAGCCTCTGTGAGGTCCTAGGCAGTGTTAGGTAAACAGAGATGCTCAGGGCTAAGGGGGAGGGTCTGGTAGGTAGCAGGGACATGGGAAACAGGCTGAGAAGGAAGTGGCCCACAGATAGGAGCTTACAGATCCAGGAAGGCCCACCTTGATTAGGGCCACAAGTTGGAAGAGCAGGCAGTGTGGGCTGCTGCAGGATGTGCGCCCTCTGGAGGCAACTGGGGGAGCAAGCGAGACACTCAGCAGCAATGCCCTGGTGTGTGGTCCAGCCAGCCCCTCTGCTGTCCCATCCTGTGGGCTGGACTTCTCACTGCCTCTCTCTGTAGGCCAACGAGGGCATCCCCATCTCGGTAGAGGACAGTGTCTTCGTGGGAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................................................................................................................................CACAAGTTGGAAGAGCAGGCAG................................................................................................................................................................................................... | 22 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................TGGAGGCAACTGGGGGAGCAAGCGAGA............................................................................................................................................ | 27 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TGGCATGTGGGACCATCTGCAGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TAGGAGCTTACAGATCCAGGAAGGC......................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................CTGGAGGCAACTGGGGGAGCAAGCGA.............................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TGGAAATGCCTAGAGGTGCTGGGGGC....................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................TGATTAGGGCCACAAGTTGGAAGAGCA........................................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................TGATTAGGGCCACAAGTTGGAAGAGC......................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TGGCATGTGGGACCATCTGCAGGAGt................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCATCTCGGTAGAGGACAGTG............. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TGTGAGGTCCTAGGCAGTGTTAGGT....................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGTAGGCCAACGAGGGCATCCCCA............................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TAGGAGCTTACAGATCCAGGAAGGCCC....................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................AGTGAGTGGCATGTGGGACCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................AGGGACATGGGAAACAGGCTGAGAAGGAAGT............................................................................................................................................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................................................................................................................................ACAAGTTGGAAGAGCAGGCAGTGTGGGC............................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TAGGTAAACAGAGATGCTCAGGGCTAA................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................CAAGTTGGAAGAGCAGGCAGTGTGGGC............................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................CCTAGAGGTGCTGGGGGCA...................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGTAGGCCAACGAGGGCATCCCCAT.............................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................TGGCATGTGGGACCATCTGCAGGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................AGTGAGTGGCATGTGGGACCATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| GTCTAAACCGAAAGCCAGTGAGTGGCATGTGGGACCATCTGCAGGAGCAGGTGAGCGCCCTCCTGCCTTTTATACTGTCTGTCCCAGCCTTCCCCTCACCACACGGGTGGCCACTGGAAATGCCTAGAGGTGCTGGGGGCACGGGGTAACCAGGTCCAGCCTCTGTGAGGTCCTAGGCAGTGTTAGGTAAACAGAGATGCTCAGGGCTAAGGGGGAGGGTCTGGTAGGTAGCAGGGACATGGGAAACAGGCTGAGAAGGAAGTGGCCCACAGATAGGAGCTTACAGATCCAGGAAGGCCCACCTTGATTAGGGCCACAAGTTGGAAGAGCAGGCAGTGTGGGCTGCTGCAGGATGTGCGCCCTCTGGAGGCAACTGGGGGAGCAAGCGAGACACTCAGCAGCAATGCCCTGGTGTGTGGTCCAGCCAGCCCCTCTGCTGTCCCATCCTGTGGGCTGGACTTCTCACTGCCTCTCTCTGTAGGCCAACGAGGGCATCCCCATCTCGGTAGAGGACAGTGTCTTCGTGGGAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................................................................CTTACAGATCCAGGAaca............................................................................................................................................................................................................................................. | 18 | aca | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGTAGAGGACAGTGTCTTCGTGGGA.. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................CCTCCTGCCTTTTATACTGTCTGTCCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................CCAGGTCCAGCCTCTGTGAGGTCCTA.................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGGACAGTGTCTaga.......... | 19 | aga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |