(7)
OTHER.mut
(1)
OVARY
(4)
PIWI.ip
(2)
PIWI.mut
(25)
TESTES

Sense strand
AGTCGCCGTCAGGCGTGCCGTGTGCAGAGCTCTCGGCCGGGCAGTGTGAGGTGAGTGGCGGCGGCGGCGGCGCAGGGGGTGGGAGGACGCAGTGCTGTGCCGAGCGCTGGTTTGTGCTGAAGGACTGGGCTGAGGCGGCTGCCGGGGCTCGTCAGATGGGGTGGGGGTCGCGTGGTGCGCTTTCACCCTGTTCCCGAGGGTTTCCCGTATCTTGGGTGTTTTGTCACTTCCCAATGTGCTCTCCTGTGGG


Size Perfect hit Total Norm Perfect Norm mjTestesWT1()
Testes Data. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
...................................................................................AGGACGCAGTGCTGTGCCGAGCG................................................................................................................................................ 23 1 11.00 11.00 11.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................AAGGACTGGGCTGAGGCGG................................................................................................................ 19 1 7.00 7.00 7.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................TGCTGAAGGACTGGGCTGAGGCGG................................................................................................................ 24 1 6.00 6.00 - - - 2.00 - 1.00 - - - 2.00 - - - - - - - - - 1.00 - - - - - -
...............................................................................................................TTGTGCTGAAGGACTGGGCTGAGGCGGCTG............................................................................................................. 30 1 6.00 6.00 6.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................GTGCTGAAGGACTGGGCTGAGGCGGaa.............................................................................................................. 27 aa 5.00 0.00 - 5.00 - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................GTGCTGAAGGACTGGGCTGAGG................................................................................................................... 22 1 4.00 4.00 - - 4.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................TGCTGAAGGACTGGGCTGAGGCGGC............................................................................................................... 25 1 4.00 4.00 - 2.00 - - - 1.00 - - - - - - - - - 1.00 - - - - - - - - - -
....................................................................................................................CTGAAGGACTGGGCTGAGGCG................................................................................................................. 21 1 4.00 4.00 - 4.00 - - - - - - - - - - - - - - - - - - - - - - - -
.................................CGGCCGGGCAGTGTGAGGTGAGTGGCGGCGGC......................................................................................................................................................................................... 32 1 4.00 4.00 4.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................TGAAGGACTGGGCTGAGGCGGCTG............................................................................................................. 24 1 3.00 3.00 - 3.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................GCGCTGGTTTGTGCTGAAGGACTGGGC........................................................................................................................ 27 1 3.00 3.00 - - - - 1.00 - - 1.00 - - - 1.00 - - - - - - - - - - - - - -
..........................................................................GGGGGTGGGAGGACGCAG.............................................................................................................................................................. 18 1 3.00 3.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................TGTGCTGAAGGACTGGGCTGAGGCGG................................................................................................................ 26 1 3.00 3.00 - - - 3.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................GCTGAAGGACTGGGCTGAGG................................................................................................................... 20 2 2.50 2.50 - 2.50 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................AGGGGGTGGGAGGACGCA............................................................................................................................................................... 18 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................GCTGAAGGACTGGGCTGAGGCGGCTa............................................................................................................. 26 a 2.00 0.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - -
..............................................................................GTGGGAGGACGCAGTGCT.......................................................................................................................................................... 18 1 2.00 2.00 - - - - - - - - 1.00 - - - - - - - 1.00 - - - - - - - - -
.......................GCAGAGCTCTCGGCCGGGCAGTGTGt......................................................................................................................................................................................................... 26 t 2.00 0.00 - - - - 1.00 - - - - - - - - - - - - - 1.00 - - - - - - -
......................................GGGCAGTGTGAGGTGAGTG................................................................................................................................................................................................. 19 1 2.00 2.00 - - - - - - - - - - - - - - 2.00 - - - - - - - - - - -
.........................AGAGCTCTCGGCCGGGCAG.............................................................................................................................................................................................................. 19 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................................................................................................TGTGCTGAAGGACTGGGCTGAGGa.................................................................................................................. 24 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................TTGTGCTGAAGGACTGGGCTGAGG................................................................................................................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................TGTGCAGAGCTCTCGGCCGGGCAGT............................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.................................................................................GGAGGACGCAGTGCTGTGCCGt................................................................................................................................................... 22 t 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
..................................GGCCGGGCAGTGTGAGGTGAG................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................GAAGGACTGGGCTGAGGCGGCTGCCGtac....................................................................................................... 29 tac 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................CGGCGGCGGCGCAGGGGG........................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...............................................................................................................TTGTGCTGAAGGACTGGGCTGAGGCGGttt............................................................................................................. 30 ttt 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................AAGGACTGGGCTGAGGC.................................................................................................................. 17 3 1.00 1.00 - - 0.67 - - - - - - 0.33 - - - - - - - - - - - - - - - -
.......................GCAGAGCTCTCGGCCGGGCAGTGTGA......................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................AGTGCTGTGCCGAGCGCTGGTTTGTGC..................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
............................................................................GGGTGGGAGGACGCAGTGCTG......................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.................................................................................................................GTGCTGAAGGACTGGGCTGAGGCGGC............................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................TTGTGCTGAAGGACTGGGCTGAGGCG................................................................................................................. 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
....................TGTGCAGAGCTCTCGGCCGGGCAGTa............................................................................................................................................................................................................ 26 a 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.....................GTGCAGAGCTCTCGGCCGGGCAGTG............................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...................................................................CGGCGCAGGGGGTGtgag..................................................................................................................................................................... 18 tgag 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................................GAAGGACTGGGCTGAGGCG................................................................................................................. 19 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.................................................................................................................GTGCTGAAGGACTGGGCTGAGGC.................................................................................................................. 23 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................GCTGGTTTGTGCTGAAGGACTGGGCT....................................................................................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
........................................................................................................CGCTGGTTTGTGCTGAAGGACTGG.......................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...................................GCCGGGCAGTGTGAGGTGAGTG................................................................................................................................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................................................................................TGCTGAAGGACTGGGCTGAGGaaa................................................................................................................ 24 aaa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................GCTGAAGGACTGGGCTGA..................................................................................................................... 18 3 0.33 0.33 - - - - - - - - - - - - - - - - - - - - - - - - 0.33 -
...................................................................................................................GCTGAAGGACTGGGCT....................................................................................................................... 16 5 0.20 0.20 - - - - - - - - - 0.20 - - - - - - - - - - - - - - - -
.......................................................................................................................AAGGACTGGGCTGAGG................................................................................................................... 16 7 0.14 0.14 - - - - - - - - - - - - - - - - - - - - - - - - - 0.14

Antisense strand
AGTCGCCGTCAGGCGTGCCGTGTGCAGAGCTCTCGGCCGGGCAGTGTGAGGTGAGTGGCGGCGGCGGCGGCGCAGGGGGTGGGAGGACGCAGTGCTGTGCCGAGCGCTGGTTTGTGCTGAAGGACTGGGCTGAGGCGGCTGCCGGGGCTCGTCAGATGGGGTGGGGGTCGCGTGGTGCGCTTTCACCCTGTTCCCGAGGGTTTCCCGTATCTTGGGTGTTTTGTCACTTCCCAATGTGCTCTCCTGTGGG


Size Perfect hit Total Norm Perfect Norm mjTestesWT1()
Testes Data. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
................GCCGTGTGCAGAGCTCTCGGCCGGGCA............................................................................................................................................................................................................... 27 1 7.00 7.00 - 7.00 - - - - - - - - - - - - - - - - - - - - - - - -
..............GTGCCGTGTGCAGAGCTCTCGGCCGGGCA............................................................................................................................................................................................................... 29 1 5.00 5.00 - - - - 2.00 - - - - - - - - 1.00 - - - 1.00 - - - - - 1.00 - -
...............CCGTGTGCAGAGCTCTCGGCCGGGCAta............................................................................................................................................................................................................... 28 ta 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................TTGTCACTTCCCAATGTGCTCTCCTG.... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
........TCAGGCGTGCCGTGTGCAGAGCTCTC........................................................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.....................................................................................................................................................................................TTCACCCTGTTCCCGAGGGTTTCCCGTA......................................... 28 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................TGCTGTGCCGAGCGCTGGTTTGTG...................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...............TGCCGTGTGCAGAGCTCTCGGCCGGGCA............................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.......GTCAGGCGTGCCGTGTGCAGAGCTC.......................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -