| Gene: Gramd1a | ID: uc009gif.1_intron_14_0_chr7_31927674_r | SPECIES: mm9 |
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(1) OTHER.mut |
(2) PIWI.ip |
(10) TESTES |
| CTTCCGGAAACTGTTCAGCAAACTTCCTGAAGCAGAGCGCCTCATCGTGGGTGAGTGTCCATGCCCCCAGCCTCCCTAAGTGACCTGGACGGGAGCTTCTGGCTTCTTTTCCTGCCTCCCTGCTGGTTTGTGGGCTACCGCGCCGGGACAGATCACGTGACTCACCGTGTCTGCCCATCTCTCCCTCTGCCACTCTCAGATTACTCCTGCGCCCTGCAGAGGGAGATCCTCCTCCAGGGCCGCCTCTAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR042485(GSM539877) mouse testicular tissue [09-002]. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................TGCCTCCCTGCTGGTTTGTGGGCTACCGCGCCGGGACAGATCACGTGACTCA..................................................................................... | 52 | 1 | 42.00 | 42.00 | 42.00 | - | - | - | - | - | - | - | - | - |
| .......AAACTGTTCAGCAAACTTCCTGAAG......................................................................................................................................................................................................................... | 25 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - |
| .................GCAAACTTCCTGAAGCAGAGCGCCTC.............................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - |
| ...........................TGAAGCAGAGCGCCTCATCGTGGatt.................................................................................................................................................................................................... | 26 | att | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................TTCCTGAAGCAGAGCGCCTCA............................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................GCCTCCCTAAGTGAagtg.................................................................................................................................................................. | 18 | agtg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| .............TTCAGCAAACTTCCTGAAGCAGAGCGCC................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ................AGCAAACTTCCTGAAGCAGAGCGCC................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............TCAGCAAACTTCCTGAAGCAGAGCGCCT............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................GTGGGCTACCGCGCCGGGACAG.................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| CTTCCGGAAACTGTTCAGCAAACTTCCTGAAGCAGAGCGCCTCATCGTGGGTGAGTGTCCATGCCCCCAGCCTCCCTAAGTGACCTGGACGGGAGCTTCTGGCTTCTTTTCCTGCCTCCCTGCTGGTTTGTGGGCTACCGCGCCGGGACAGATCACGTGACTCACCGTGTCTGCCCATCTCTCCCTCTGCCACTCTCAGATTACTCCTGCGCCCTGCAGAGGGAGATCCTCCTCCAGGGCCGCCTCTAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR042485(GSM539877) mouse testicular tissue [09-002]. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................GGCTACCGCGCCaag......................................................................................................... | 15 | aag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................CCATCTCTCCCTCTGCCA......................................................... | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | 0.33 |