| Gene: Mag | ID: uc009ggz.1_intron_2_0_chr7_31686179_r | SPECIES: mm9 |
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(6) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| CAGGAACCTCTATGGCACCCAGAGCCTCGAGCTGCCTTTCCAGGGAGCACGTGAGTGATGTGATCTGGGGGTGGGAGCCACAGGAAGAAGGGGGACCCTCTTGGATCCGCCACACCCCTACTTTTGCTTCTGATCCAGCCACTGAGTATGGGTCAGCTATGTAGATGATAAAAGAGAGAAAGATGTTATCTAGATTTGCCATCCCAGCTACATGGGAGGCTGAGTTCTAAGCCTGTTCAGGAAACTTAGGAAGACTGGAATTGGCTCAGTGGTAGAGCCTCTGCCTAGAATCCCCCAGGGAGGGGCTAGGGCCCAGGGATGAATCATTTACTTAGTACTTAGGAGGCCATGGGTTCAAACCCCAGCACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAATAAATAAACTCTCTGTTTGTAACTGATGAGTCAAGGCTGCCTAAAAATTTGGGCTCTGACTCCCTGTGCCATCCTCATGCCTACCAATATCCCTGAGGGCTCCTGGTCTCGTTCTCTACCCTTAGACCGACTGATGTGGGCCAAAATCGGTCCTGTGGGTGCTGTGGTCGCCTTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................................................................................CAGTGGTAGAGCCgtgc.................................................................................................................................................................................................................................................................................................................. | 17 | gtgc | 8.00 | 0.00 | - | 4.00 | - | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TGAGTATGGGTCAGCTATGTAGATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................CAGTGGTAGAGCCTttga................................................................................................................................................................................................................................................................................................................. | 18 | ttga | 3.00 | 0.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................TGTAGATGATAAAAGAGAGAAAGATGc................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | c | 3.00 | 0.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGTAACTGATGAGTCAAGGCTG........................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................GCTCAGTGGTAGAGCCgtg................................................................................................................................................................................................................................................................................................................... | 19 | gtg | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TATGTAGATGATAAAAGAGAGAAAGATG.................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................TACTTAGTACTTAGGAGGCCATGGGT........................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TACATGGGAGGCTGAGTTCTAAGCCTa.................................................................................................................................................................................................................................................................................................................................................................. | 27 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TAGGAAGACTGGAATTGGCTCAGTGG............................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................GCTCAGTGGTAGAGCCatgc.................................................................................................................................................................................................................................................................................................................. | 20 | atgc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAATTTGGGCTCTGACTCCCTGT............................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TACATGGGAGGCTGAGTTCTAAGCCTG.................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TATGTAGATGATAAAAGAGAGAAAGATGT................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TGTAGATGATAAAAGAGAGAAAGATGT................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TTCTAAGCCTGTTCAGGAAACTTAGGAA................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................GTAGATGATAAAAGAGAGAAAGATGTTA................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................TGAATCATTTACTTAGTACTTAGGAGG................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................TAAGCCTGTTCAGGAAACTTAGGAAGAC.............................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................AGGAAACTTAGGAAGACTGGAATTGG..................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TAGGAAGACTGGAAacgt..................................................................................................................................................................................................................................................................................................................................... | 18 | acgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................................................................TAGGAAGACTGGAATTGGCTCAGTGGT............................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................TGCCTTTCCAGGGAGCACGTGAGa..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................TGTAGATGATAAAAGAGAGAAAGATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TAGGAAGACTGGAATTGGCTCAGTG.............................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................TGGTAGAGCCTCTGCCTAGAATCCata..................................................................................................................................................................................................................................................................................................... | 27 | ata | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTTGTAACTGATGAGTCAAGGt.......................................................................................................................................... | 26 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TACATGGGAGGCTGAGTTCTAAGCCTGT................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................TAGAGCCTCTGCCTAGAATCCCCCAGGGAGG.............................................................................................................................................................................................................................................................................................. | 31 | 13 | 0.08 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CAGGAACCTCTATGGCACCCAGAGCCTCGAGCTGCCTTTCCAGGGAGCACGTGAGTGATGTGATCTGGGGGTGGGAGCCACAGGAAGAAGGGGGACCCTCTTGGATCCGCCACACCCCTACTTTTGCTTCTGATCCAGCCACTGAGTATGGGTCAGCTATGTAGATGATAAAAGAGAGAAAGATGTTATCTAGATTTGCCATCCCAGCTACATGGGAGGCTGAGTTCTAAGCCTGTTCAGGAAACTTAGGAAGACTGGAATTGGCTCAGTGGTAGAGCCTCTGCCTAGAATCCCCCAGGGAGGGGCTAGGGCCCAGGGATGAATCATTTACTTAGTACTTAGGAGGCCATGGGTTCAAACCCCAGCACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAAAATAAATAAACTCTCTGTTTGTAACTGATGAGTCAAGGCTGCCTAAAAATTTGGGCTCTGACTCCCTGTGCCATCCTCATGCCTACCAATATCCCTGAGGGCTCCTGGTCTCGTTCTCTACCCTTAGACCGACTGATGTGGGCCAAAATCGGTCCTGTGGGTGCTGTGGTCGCCTTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................................................TCAGTGGTAGAGCCTCTGCaga................................................................................................................................................................................................................................................................................................................. | 22 | aga | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTGGTCTCGTTCTCTACCCT..................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................TTCAAACCCCAGCAaaaa.............................................................................................................................................................................................................................. | 18 | aaaa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................CTGGAATTGGCTCAGTGGgtta............................................................................................................................................................................................................................................................................................................................. | 22 | gtta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAGAGAccc............................................................................................................................................................................................ | 31 | ccc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................................................................................................TGGCTCAGTGGTAGAGCCTCTGCCTAcga.............................................................................................................................................................................................................................................................................................................. | 29 | cga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................CTGCCTAGAATCCCCCAttta.................................................................................................................................................................................................................................................................................................... | 21 | ttta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................GCCTCTGCCTAGAATCCCCCAca.................................................................................................................................................................................................................................................................................................... | 23 | ca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................................................................................................................GAGCCTCTGCCTAGAATCCCCCAGGGA................................................................................................................................................................................................................................................................................................ | 27 | 14 | 0.29 | 0.29 | - | 0.07 | - | - | - | - | - | 0.07 | - | 0.07 | - | - | - | - | - | - | - | - | 0.07 |
| ................................................................................................................................................................................................................................................................................TAGAGCCTCTGCCTAGAATCCCCCAGGGA................................................................................................................................................................................................................................................................................................ | 29 | 13 | 0.08 | 0.08 | - | - | - | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................GGTAGAGCCTCTGCCTAGAATCCCCCAGGGA................................................................................................................................................................................................................................................................................................ | 31 | 13 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................AGAGCCTCTGCCTAGAATCCCCCAGGGA................................................................................................................................................................................................................................................................................................ | 28 | 14 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | 0.07 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................GCCTCTGCCTAGAATCCCCCAGGGA................................................................................................................................................................................................................................................................................................ | 25 | 15 | 0.07 | 0.07 | - | - | - | - | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |