uc009gcs.1_intron_2_0_chr7_30748261

TAGGCTTGTGGTGTAGGAAGATTTGCAGATCAGCCTAGGAAACCCTGGGGAGAAACGAAGGACTGCTTTGTTGTAGTAAATACCTCTCCCAACCCCATAGCCCAAACTGCCTCAGCCAGGGTTATGTCCACACTCAGCTTTCTTTTCTTTCTTTTTTTTTTTTTTTCTCTTATAAACCATTTATTTCTCCCGGCCGGAAGGTGGGCATCGCTACCGGTGGATAAACACAGAACACTACGTGGAGCGAGGC
..........................................................................................................((.((...(((.(((...................................................................)))))).)).))..................................................
....................................................................................................101................................................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)

GSM475280(GSM475280)
Mili-IP. (mili testes)

SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)

SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)

GSM475281(GSM475281)
total RNA. (testes)

SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)

SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)

SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)

GSM475279(GSM475279)
Miwi-IP. (miwi testes)

SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)

SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)

SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)

SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)

SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)

SRR028731(GSM400968)
Mili-wt-associated. (testes)

SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)

SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)

SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)

SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)

SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)

SRR037902(GSM510438)
testes_rep3. (testes)

SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)

SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)

SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)

SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)

mjTestesWT1()
Testes Data. (testes)

SRR037901(GSM510437)
testes_rep2. (testes)

mjTestesKO8()
Testes Data. (Zcchc11 testes)

SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)

SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)

mjTestesWT2()
Testes Data. (testes)

SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)

mjTestesKO7()
Testes Data. (Zcchc11 testes)

SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)

SRR014236(GSM319960)
10 dpp total. (testes)

SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)

SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)

SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)

mjTestesWT3()
Testes Data. (testes)

SRR037900(GSM510436)
testes_rep1. (testes)

mjTestesWT4()
Testes Data. (testes)

mjTestesKO6()
Testes Data. (Zcchc11 testes)

GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)

SRR037903(GSM510439)
testes_rep4. (testes)

SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)

SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)

GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)

SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)

SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)

SRR014229(GSM319953)
10 dpp MILI. (mili testes)

SRR014234(GSM319958)
Ovary total. (ovary)

SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)

SRR014231(GSM319955)
16.5 dpc total. (testes)

GSM509280(GSM509280)
small RNA cloning by length. (testes)

SRR014235(GSM319959)
2 dpp total. (testes)

mjTestesKO5()
Testes Data. (Zcchc11 testes)

GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)

.........................................................................................................................................................................................................................TGGATAAACACAGAACACTACGTGGAGCGA...

303.50

105.00

69.00

1.50

68.00

0.50

2.50

40.00

1.00

12.50

0.50

1.00

0.50

179.00

2.50

42.50

25.50

2.50

1.50

18.00

1.50

0.50

1.50

0.50

30.00

0.50

4.50

0.50

16.50

9.00

3.00

6.50

4.50

1.00

0.50

163.00

10.50

84.50

1.50

35.50

2.50

1.00

0.50

1.00

0.50

10.00

1.50

4.00

1.00

0.50

1.50

2.50

1.00

2.00

0.50

136.50

0.50

16.50

0.50

5.50

0.50

22.50

6.00

12.00

13.50

23.50

0.50

2.00

6.00

7.00

5.00

2.00

0.50

2.00

4.00

0.50

1.50

0.50

1.50

0.50

106.50

0.50

3.50

17.50

8.00

8.50

18.50

8.50

1.00

7.00

7.50

9.00

3.00

4.00

0.50

4.00

1.00

0.50

98.50

17.50

20.50

1.00

13.50

2.00

0.50

2.50

0.50

1.00

12.00

1.00

2.00

1.50

3.50

0.50

3.50

2.00

3.50

0.50

2.50

0.50

83.00

38.00

26.50

16.00

22.00

1.00

14.50

2.50

0.50

78.50

37.50

31.50

1.00

11.00

1.00

4.50

1.50

5.50

4.50

0.50

1.50

16.00

63.50

12.50

12.00

2.00

1.00

7.50

0.50

9.00

4.50

4.00

0.50

2.00

3.00

0.50

1.00

0.50

61.00

2.00

10.00

6.50

9.00

2.00

2.50

6.00

5.50

1.00

4.50

2.00

5.00

2.50

1.00

0.50

48.50

6.50

1.00

0.50

1.00

1.50

0.50

7.00

3.00

5.00

3.50

4.00

0.50

2.50

3.50

2.00

0.50

1.50

0.50

45.50

106.50

1.00

2.00

0.50

3.00

0.50

4.50

0.50

2.00

5.50

1.50

0.50

10.00

1.00

3.00

3.50

4.00

0.50

1.00

0.50

41.00

4.50

12.00

1.50

0.50

7.50

0.50

6.50

0.50

2.50

1.50

0.50

1.50

0.50

41.00

61.00

1.00

14.00

1.00

4.00

3.50

1.50

3.50

4.50

2.00

2.50

0.50

3.00

38.00

13.00

0.50

5.50

6.00

0.50

3.00

1.00

0.50

1.00

3.50

1.00

37.50

2.00

5.00

0.50

1.00

4.00

2.50

1.00

4.00

3.50

0.50

2.00

0.50

3.50

1.00

1.50

0.50

1.00

0.50

1.00

0.50

tct

32.00

37.50

16.50

5.50

0.50

1.50

1.00

2.50

3.50

1.00

26.50

3.00

4.00

4.50

1.50

1.00

1.50

1.00

3.50

0.50

1.50

0.50

23.50

1.50

8.00

0.50

1.00

0.50

1.50

0.50

2.00

3.50

1.00

1.50

1.00

20.50

5.50

7.00

1.00

2.00

0.50

1.00

3.50

18.50

2.50

5.50

0.50

4.50

0.50

1.00

0.50

1.00

.........................................................................................................................................................................TTATAAACCATTTATTTCTCCCGGC........................................................

16.33

11.00

0.67

0.33

2.67

0.33

1.33

16.00

5.00

1.50

0.50

2.50

0.50

1.50

0.50

1.50

0.50

1.50

15.50

2.75

7.00

0.25

0.50

1.00

0.25

0.75

0.25

0.50

1.00

0.25

0.50

0.25

15.00

3.50

0.50

2.00

0.50

3.00

1.50

0.50

15.00

0.50

5.00

0.50

1.00

0.50

1.50

0.50

1.00

1.50

0.50

1.00

0.50

14.00

106.50

0.50

3.50

0.50

2.00

1.00

1.50

1.00

4.00

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGC........................................................

12.67

10.67

0.67

0.33

0.67

12.00

5.00

3.00

1.00

0.50

ttt

11.50

37.50

8.00

0.50

1.00

11.00

8.00

0.50

1.00

0.50

1.00

11.00

2.50

0.50

1.00

2.00

1.00

2.00

0.50

11.00

1.50

4.50

0.50

3.50

0.50

11.00

303.50

3.50

2.50

2.00

0.50

9.50

4.50

0.50

1.00

2.00

0.50

9.50

5.00

1.50

2.50

0.50

9.00

38.00

3.00

1.50

0.50

1.00

0.50

1.00

7.50

98.50

1.50

0.50

1.00

2.00

1.00

0.50

7.50

0.50

3.50

0.50

1.00

7.00

0.50

1.50

0.50

2.00

0.50

tct

7.00

15.00

3.50

1.50

0.50

1.00

6.00

2.00

0.50

1.00

2.00

0.50

6.00

0.50

2.00

0.50

1.00

0.50

5.00

3.50

1.00

0.50

tctt

4.50

15.00

2.50

1.00

0.50

4.50

0.50

3.00

4.50

26.50

2.00

1.00

0.50

1.00

4.50

1.00

0.50

tctt

4.50

37.50

1.50

2.50

0.50

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCtgt.....................................................

tgt

4.00

12.67

1.00

0.33

0.67

0.33

.......................................................................................................................................................................TCTTATAAACCATTTATTTCTCCCGGC........................................................

3.67

1.33

0.33

3.50

9.50

1.50

0.50

1.00

3.50

0.50

1.00

0.50

1.00

0.50

3.50

23.50

1.00

0.50

1.00

0.50

3.25

1.00

0.50

0.25

0.50

3.00

1.00

0.50

1.00

0.50

3.00

1.00

0.50

3.00

0.50

2.00

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGtctg......................................................

tctg

3.00

0.00

1.00

3.00

1.00

0.50

3.00

0.50

3.00

163.00

0.50

1.50

1.00

3.00

1.00

0.50

3.00

63.50

1.50

0.50

3.00

0.50

1.50

1.00

ttt

3.00

15.00

2.50

0.50

3.00

18.50

0.50

1.00

2.75

0.50

0.25

0.50

2.75

0.50

0.25

0.75

0.25

2.50

61.00

1.00

0.50

tct

2.50

7.50

1.50

0.50

2.50

1.00

0.50

2.50

0.50

1.00

0.50

2.50

2.00

0.50

2.50

1.50

0.50

2.50

1.50

0.50

2.50

0.50

1.00

2.50

0.25

0.75

0.25

2.50

0.50

2.50

0.50

1.00

0.50

tct

2.50

6.00

1.00

0.50

............................................................................................................................................................................TAAACCATTTATTTCTCCCGGC........................................................

2.33

2.00

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGG.........................................................

2.33

1.00

0.67

0.33

2.25

0.25

0.50

0.25

0.50

2.25

0.25

0.50

1.50

2.00

15.00

0.50

1.00

0.50

2.00

1.25

0.25

2.00

1.50

0.50

2.00

0.50

1.00

2.00

0.50

1.00

0.50

2.00

4.50

0.50

1.00

0.50

2.00

1.00

0.50

2.00

0.00

2.00

0.25

0.75

0.25

0.50

2.00

38.00

0.50

1.00

...............................................................................................................................................................................ACCATTTATTTCTCCCGGCtcga....................................................

tcga

2.00

0.00

2.00

0.50

..................................................................................................................................................................................ATTTATTTCTCCCGGCtgt.....................................................

tgt

2.00

0.00

1.00

tcga

2.00

2.50

0.50

2.00

0.25

0.50

0.25

2.00

0.00

2.00

.........................................................................................................................................................................TTATAAACCATTTATTTCTCCCGG.........................................................

2.00

1.33

0.33

.........................................................................................................................................................................TTATAAACCATTTATTTCTCCCGGCtgt.....................................................

tgt

1.67

16.33

0.67

0.33

1.50

41.00

0.50

1.50

15.00

0.50

tgt

1.50

11.00

1.00

0.50

agc

1.50

0.50

1.50

1.00

0.50

aga

1.50

41.00

0.50

tgt

1.50

136.50

1.50

1.00

0.50

1.50

26.50

0.50

1.50

1.00

0.50

tta

1.50

37.50

0.50

1.50

1.00

0.50

1.50

0.50

1.00

tat

1.50

37.50

0.50

1.50

0.25

0.50

0.25

1.50

0.50

1.50

37.50

0.50

1.00

1.50

303.50

1.00

0.50

1.50

1.00

0.50

1.50

0.50

1.50

0.50

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCtt......................................................

1.33

12.67

0.33

1.00

1.25

0.25

0.75

1.25

0.25

0.75

1.25

0.25

1.25

0.25

1.00

61.00

0.50

tctt

1.00

6.00

0.50

1.00

37.50

0.50

1.00

0.50

1.00

106.50

0.50

1.00

0.00

1.00

..............................................................................................................................................................................AACCATTTATTTCTCCCGtctg......................................................

tctg

1.00

0.00

1.00

.......................................................................................................................................................................TCTTATAAACCATTTATTTCTCtcgg.........................................................

tcgg

1.00

0.00

1.00

.........................................................................................................................................................................TTATAAACCATTTATTTCTCCCGtc........................................................

1.00

0.00

1.00

0.00

1.00

37.50

0.50

1.00

0.50

0.25

1.00

0.00

1.00

0.50

tcat

1.00

0.00

1.00

0.50

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGtct.......................................................

tct

1.00

0.00

1.00

agcg

1.00

0.00

1.00

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGctg.......................................................

ctg

1.00

0.00

1.00

163.00

0.50

cgc

1.00

0.00

1.00

ggt

1.00

0.00

1.00

0.50

tgc

1.00

0.00

1.00

38.00

0.50

1.00

0.50

taa

1.00

0.00

1.00

ttt

1.00

61.00

0.50

1.00

18.50

0.50

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGctgg......................................................

ctgg

1.00

0.00

1.00

0.00

1.00

179.00

0.50

1.00

0.50

atc

1.00

23.50

0.50

tagt

1.00

0.00

1.00

0.00

1.00

ggga

1.00

48.50

0.50

1.00

0.00

1.00

11.00

0.50

1.00

0.00

1.00

48.50

0.50

........................................................................................................................................................................CTTATAAACCATTTATTTCTCCCGGCtggt....................................................

tggt

1.00

0.00

1.00

48.50

0.50

tctc

1.00

98.50

0.50

1.00

0.00

1.00

....CTTGTGGTGTAGGAAGAT....................................................................................................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................TTTATTTCTCCCGGCCGGAAGGc................................................

1.00

0.00

1.00

0.50

1.00

41.00

0.50

1.00

0.75

0.25

1.00

0.00

1.00

0.50

cagg

1.00

0.00

1.00

20.50

0.50

..........................................................................................................................................................................TATAAACCATTTATTTCTCCggct........................................................

ggct

1.00

0.00

1.00

.......................................................................................................................................................................TCTTATAAACCATTTATTTCTCCCGGCtgt.....................................................

tgt

1.00

3.67

0.33

1.00

0.50

....................................................................................................................................................................................TTATTTCTCCCGGCCGGAAGGTGGGCATt.........................................

1.00

0.00

1.00

tgt

1.00

0.00

1.00

tagc

1.00

0.00

1.00

0.00

1.00

tagg

1.00

5.00

1.00

0.50

agt

1.00

41.00

1.00

106.50

1.00

136.50

0.50

ttgg

1.00

63.50

0.50

..................................................................................................................................................................................ATTTATTTCTCCCGGatgg.....................................................

atgg

1.00

0.00

1.00

0.00

1.00

tttt

1.00

37.50

0.50

1.00

63.50

0.50

1.00

63.50

1.00

0.00

1.00

tcat

1.00

2.50

0.50

0.75

0.50

0.25

0.75

0.25

0.75

0.25

0.50

............................................................................................................................................................................TAAACCATTTATTTCTCCCGG.........................................................

0.67

0.33

.........................................................................................................................................................................TTATAAACCATTTATTTCTCCCGGCa.......................................................

0.67

16.33

0.67

taa

0.50

37.50

0.50

ctg

0.50

48.50

0.50

tcct

0.50

37.50

0.50

ggc

0.50

2.50

0.50

ttg

0.50

63.50

0.50

23.50

0.50

136.50

0.50

0.25

0.50

0.25

0.50

98.50

0.50

cggt

0.50

48.50

0.50

179.00

0.50

tta

0.50

38.00

0.50

2.50

0.50

tctt

0.50

7.50

0.50

tctt

0.50

98.50

0.50

ttc

0.50

23.50

0.50

ttg

0.50

tgac

0.50

2.50

0.50

cagg

0.50

9.50

0.50

179.00

0.50

303.50

0.50

gggt

0.50

16.00

0.50

303.50

0.50

taa

0.50

61.00

0.50

acct

0.50

7.00

0.50

1.00

0.50

ttgt

0.50

63.50

0.50

tgtg

0.50

11.00

0.50

gtga

0.50

1.50

0.50

61.00

0.50

41.00

0.50

tta

0.50

7.50

0.50

tcga

0.50

7.00

0.50

tcat

0.50

7.50

0.50

63.50

0.50

38.00

0.50

cgct

0.50

163.00

0.50

tcat

0.50

37.50

0.50

aat

0.50

15.00

0.50

tctc

0.50

7.50

0.50

tga

0.50

41.00

0.50

106.50

0.50

ttt

0.50

18.50

0.50

ttc

0.50

37.50

0.50

tcat

0.50

6.00

0.50

tagc

0.50

tcc

0.50

7.50

0.50

2.00

0.50

20.50

0.50

303.50

0.50

11.00

0.50

16.00

0.50

tat

0.50

163.00

0.50

6.00

0.50

20.50

0.50

caga

0.50

7.00

0.50

gga

0.50

2.50

0.50

1.50

0.50

aagc

0.50

aagt

0.50

9.50

0.50

7.00

0.50

tttt

0.50

15.00

0.50

2.50

0.50

136.50

0.50

2.50

0.50

agg

0.50

48.50

0.50

ccgt

0.50

2.25

0.25

ttt

0.50

tcgt

0.50

2.25

0.50

tgc

0.50

163.00

0.50

7.50

0.50

tct

0.50

61.00

0.50

4.50

0.50

38.00

0.50

18.50

0.50

tcta

0.50

7.50

0.50

............................................................................................................................................................................TAAACCATTTATTTCTCCCGGCCGGAA...................................................

0.50

0.25

0.50

61.00

0.50

ccga

0.50

1.00

0.50

0.25

0.50

11.00

0.50

ggc

0.50

48.50

0.50

7.00

0.50

ccga

0.50

7.00

0.50

9.50

0.50

1.25

0.25

0.50

61.00

0.50

7.00

0.50

106.50

0.50

taa

0.50

38.00

0.50

37.50

0.50

tctc

0.50

15.00

0.50

taga

0.50

7.00

0.50

tctc

0.50

37.50

0.50

3.50

0.50

20.50

0.50

tttt

0.50

15.00

0.50

15.00

0.50

2.00

0.50

aga

0.50

2.50

0.50

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCtggc....................................................

tggc

0.33

12.67

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCttt.....................................................

ttt

0.33

12.67

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCta......................................................

0.33

12.67

0.33

.........................................................................................................................................................................TTATAAACCATTTATTTCTCCCGGCttg.....................................................

ttg

0.33

16.33

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCtgct.......................................................

tgct

0.33

............................................................................................................................................................................TAAACCATTTATTTCTCCCGGa........................................................

0.33

0.67

0.33

.........................................................................................................................................................................TTATAAACCATTTATTTCTCCCGGat.......................................................

0.33

2.00

0.33

.......................................................................................................................................................................TCTTATAAACCATTTATTTCTCCCGt.........................................................

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCC...........................................................

0.33

.......................................................................................................................................................................TCTTATAAACCATTTATTTCTCCCGtatg......................................................

tatg

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGatg......................................................

atg

0.33

2.33

0.33

............................................................................................................................................................................TAAACCATTTATTTCTCCCGGCtggt....................................................

tggt

0.33

2.33

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCtc......................................................

0.33

12.67

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCtcg.....................................................

tcg

0.33

12.67

0.33

........................................................................................................................................................................CTTATAAACCATTTATTTCTCCC...........................................................

0.33

.......................................................................................................................................................................TCTTATAAACCATTTATTTCTCCCG..........................................................

0.33

.......................................................................................................................................................................TCTTATAAACCATTTATTTCTCCCGtctg......................................................

tctg

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCtgtt....................................................

tgtt

0.33

12.67

0.33

..........................................................................................................................................................................TATAAACCATTTATTTCTCCCGGCg.......................................................

0.33

12.67

0.33

.........................................................................................................................................................................TTATAAACCATTTATTTCTCCCGGCtt......................................................

0.33

16.33

0.33

cgt

0.25

2.25

0.25

aaac

0.25

0.50

0.25

cacg

0.25

3.25

0.25

2.75

0.25

tta

0.25

1.25

0.25

2.75

0.25

1.25

0.25

1.25

0.25

ccac

0.25

1.25

0.25

......................................................................................................................................................................................................AGGTGGGCATCGCTACCGG.................................

0.25

cga

0.25

ccta

0.25

2.00

0.25

tac

0.25

0.50

0.25

0.11