| Gene: Ryr1 | ID: uc009gao.1_intron_32_0_chr7_29837721_r | SPECIES: mm9 |
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(1) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| TCGTGCGCAGAGTTCAGGAAGTGTCCGCAGTGCTCTATCACCTGGACCAGGTGGGCGGGCGCCTCTGTGGCCGAGTCTTTGCATAGGGCCTGGTCTGTGGGCGGGGCCAGATGGTGATAGGAGGGGCTAGGGACAGAGCCTTTCTCTCAAGGAAGCATGGAGCGGTGTGGATCTGGGAAAGGGGCATACTGCATCTAGGGACAAGTGTGATAAAGCACTGGGGCTAGAGTGAGGCTTCTGGAAGGTGCCTTGAGTCTGTTGGCGGGGGTCGGGGGTGTGGGGAGCCTAGGCCTTCCTTTGACGGCTCTGCACGTAGACTTGAACACACATGGACAGCATCGCTAGGGTTAGGTGGAACTTGGGTCATTGCCATGATCTGAGGAGACGTGACAGACTGCCCCACTCCCTAGACGGAGCATCCTTACAAGTCCAAGAAGGCGGTGTGGCATAAACTTCTGTC ...................................................................................................................................................................................((..((.....))..)).......(((((......)))))..((((..(((((.(((((((....(((..(((((((((...(((((((((((((((.((((...)))).))))))....)))..))))))...))))))))).)))...)))).))).)))))..))))............................................................................................................... .................................................................................................................................................................................178.........................................................................................................................................................................350............................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................................................................................................................................................TGAACACACATGGACAGCATCGCTAGG.................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................GGCATACTGCATCTAGGGACAAGTGT............................................................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................TGCACGTAGACTTGAACACACATGGACAGC........................................................................................................................... | 30 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................TTGAACACACATGGACAGCATCGCTAG................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................TTGAACACACATGGACAGCAT......................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................................................................................................................................................................TGAACACACATGGACAGCATCGCTAGGG................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................TAGACTTGAACACACATGGACAGCATC........................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGACGTGACAGACTGCCCCACT........................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................TGGACAGCATCGCTAGGGTTAGGTGG......................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................CAGACTGCCCCACTCCCTAG.................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................................................................................................................................TTGAACACACATGGACAGCATCGCTA.................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................TGCACGTAGACTTGAACACACATGGACAG............................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................TTGAGTCTGTTGGCGGGGGTCGGGG.......................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................TGCATCTAGGGACAAGTGTGATAAAG..................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................................................................................................................................................................................................TGAACACACATGGACAGCATCGCTAG................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................TTGAACACACATGGACAGCATCGCTAGG.................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| TCGTGCGCAGAGTTCAGGAAGTGTCCGCAGTGCTCTATCACCTGGACCAGGTGGGCGGGCGCCTCTGTGGCCGAGTCTTTGCATAGGGCCTGGTCTGTGGGCGGGGCCAGATGGTGATAGGAGGGGCTAGGGACAGAGCCTTTCTCTCAAGGAAGCATGGAGCGGTGTGGATCTGGGAAAGGGGCATACTGCATCTAGGGACAAGTGTGATAAAGCACTGGGGCTAGAGTGAGGCTTCTGGAAGGTGCCTTGAGTCTGTTGGCGGGGGTCGGGGGTGTGGGGAGCCTAGGCCTTCCTTTGACGGCTCTGCACGTAGACTTGAACACACATGGACAGCATCGCTAGGGTTAGGTGGAACTTGGGTCATTGCCATGATCTGAGGAGACGTGACAGACTGCCCCACTCCCTAGACGGAGCATCCTTACAAGTCCAAGAAGGCGGTGTGGCATAAACTTCTGTC ...................................................................................................................................................................................((..((.....))..)).......(((((......)))))..((((..(((((.(((((((....(((..(((((((((...(((((((((((((((.((((...)))).))))))....)))..))))))...))))))))).)))...)))).))).)))))..))))............................................................................................................... .................................................................................................................................................................................178.........................................................................................................................................................................350............................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................GGCGGGCGCCTCTGTGGCCGAGTCTTTGCA......................................................................................................................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................TCCGCAGTGCTCTATCACCTGGACCA........................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................TGACGGCTCTGCACGTAGACTTGAACA....................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............TCAGGAAGTGTCCGCAGTGCTCTATC..................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............TCAGGAAGTGTCCGCAGTGCTCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |