| Gene: Ryr1 | ID: uc009gao.1_intron_1_0_chr7_29788805_r.5p | SPECIES: mm9 |
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(1) OTHER.ip |
(5) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(3) PIWI.mut |
(20) TESTES |
| CATGGGTTTGAGACCCACACTCTAGAAGAGCACAACCTAGCCAATTACATGTGAGTGTGGGAAGTGATGGGTGATCAGAGGGTGGGAGTGAGCCTGTTGATAGCCAGGGCAGGACCGCTGAGCCTGGGCCAGCTGCAGAAAAGGATGTGGGTGTCCGTGTGGGTAGGGTTTAGACAATCAGAAATCAAGCATCACTGTGGCTCTGTGAAAAAGTGAAATCCCCTAGTGAGGGGATGGGGGCGTGGCTCAG ............................................................................................((((........))))((..((...((((..(((((((..((((......((((......))))......)))))))))))....))))...))..))............................................................ ............................................................................................93...................................................................................................194...................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesWT4() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................TGATAGCCAGGGCAGGACCGCTGAGa............................................................................................................................... | 26 | a | 6.00 | 2.00 | - | - | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TGAGACCCACACTCTAGAAGAGCACAACC..................................................................................................................................................................................................................... | 29 | 1 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - |
| ..................................................................................................................................................................GTAGGGTTTAGACAATCAGAAATCAAGC............................................................ | 28 | 1 | 6.00 | 6.00 | - | 1.00 | 3.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGATAGCCAGGGCAGGACCGCTGA................................................................................................................................. | 24 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGATAGCCAGGGCAGGACCGCTGAG................................................................................................................................ | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TCAGAAATCAAGCATCACTGTGGCTCTG............................................. | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................TGATAGCCAGGGCAGGACCGCTGAGC............................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - |
| .........................................................TGGGAAGTGATGGGTGATCAGAGG......................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGGGAAGTGATGGGTGATCAGAGGGT....................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........TGAGACCCACACTCTAGAAGAGCACAACaa.................................................................................................................................................................................................................... | 30 | aa | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................AAATCAAGCATCACTGTGGCTCTGTGA.......................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGGGAAGTGATGGGTGATCAGAGGG........................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................GCCAATTACATGTGAGTGTGGGAAGTG........................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TGTGGCTCTGTGAAAAAGTGAAATCCCC........................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................GTAGGGTTTAGACAATCAGAAATCAAG............................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................TAGCCAATTACATGTGAGTGTGGGAAG.......................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TTACATGTGAGTGTGGGAAGTGATGGGT.................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................GGGTGATCAGAGGGTGGGAGTGAGCCTG.......................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TGAGACCCACACTCTAGAAGAGCACAACCTA................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................................................................................................................................TAGACAATCAGAAATCAAGCATCACT...................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TGAGACCCACACTCTAGAAGAGCACAACCT.................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................TTACATGTGAGTGTGGGAAGTGATG..................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................CTCTGTGAAAAAGTGAAATCCCCTAGT....................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................ATGTGAGTGTGGGAAGTGATGGG................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGGGTGATCAGAGGGTGGGAGTGAGCCT........................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TGAGACCCACACTCTAGAAGAGCACAAC...................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................AAGTGATGGGTGATCAGAGGGTGG..................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TCAGAAATCAAGCATCACTGTGGCTC............................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................GCCAATTACATGTGAGTGTGGGAAGTGA....................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGCAGAAAAGGATGTGGGTGTCCGTGT.......................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TTACATGTGAGTGTGGGAAGTGATGGG................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........TGAGACCCACACTCTAGAAGAGCACAA....................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........AGACCCACACTCTAGAAGAGCACAACC..................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TAGACAATCAGAAATCAAGCATCACTG..................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGGGTGATCAGAGGGTGGGAGTGAGCCTa.......................................................................................................................................................... | 29 | a | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TCAGAAATCAAGCATCACTGTGGCTCTGa............................................ | 29 | a | 1.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGGGTGATCAGAGGGTGGGAGTGAGC............................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGGGTGATCAGAGGGTGGGAGTGA............................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TAGACAATCAGAAATCAAGCATCACTGTG................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................CTGCAGAAAAGGATGTGGGTGTCCGT............................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TAGACAATCAGAAATCAAGCATCACTGT.................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CATGGGTTTGAGACCCACACTCTAGAAGAGCACAACCTAGCCAATTACATGTGAGTGTGGGAAGTGATGGGTGATCAGAGGGTGGGAGTGAGCCTGTTGATAGCCAGGGCAGGACCGCTGAGCCTGGGCCAGCTGCAGAAAAGGATGTGGGTGTCCGTGTGGGTAGGGTTTAGACAATCAGAAATCAAGCATCACTGTGGCTCTGTGAAAAAGTGAAATCCCCTAGTGAGGGGATGGGGGCGTGGCTCAG ............................................................................................((((........))))((..((...((((..(((((((..((((......((((......))))......)))))))))))....))))...))..))............................................................ ............................................................................................93...................................................................................................194...................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesWT4() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................TCTAGAAGAGCACAACCTAGCCAATTA........................................................................................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | - | 1.00 | - | 1.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................GAAGAGCACAACCTAGCCAATTACA......................................................................................................................................................................................................... | 25 | 1 | 4.00 | 4.00 | 1.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TCCGTGTGGGTAGGGTTTAGACAATCAGA.................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................AGGGTTTAGACAATCAGAAATCAAGCA........................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TCCGTGTGGGTAGGGTTTAGACAATCA...................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACCGCTGAGCCTGGGCCAGCTGCAGAA.............................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TAGACAATCAGAAATCAAGCATCACTG..................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................AGAAGAGCACAACCTAGCCAATTACA......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................GAAGAGCACAACCTcct.................................................................................................................................................................................................................... | 17 | cct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................GGACCGCTGAGCCTGGGCCAGCTGCAGA............................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TGGGTTTGAGACCCACACTCTAGAAGAa............................................................................................................................................................................................................................. | 28 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................CTAGCCAATTACATGTGAGTGTGGGAct............................................................................................................................................................................................ | 28 | ct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................................................GGGTTTAGACAATCAGAAATC................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GTGTGGGTAGGGTTTAGACAATCAGAA................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................AATCAGAAATCAAGCATCACTGTGGCTCT.............................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TCTAGAAGAGCACAACCTAGCCAATTACA......................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TAGAAGAGCACAACCTAGCCAATTA........................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................GGTTTAGACAATCAGAAATCAAGCATCA........................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................TCTAGAAGAGCACAACCTA................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................GAAAAGGATGTGGGTGTCCGTGTGGGTA..................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TGTGGGTAGGGTTTAGACAATCAGAAA.................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................GAGCACAACCTAGCCAAT............................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................GAGCACAACCTAGCCAATTACATGTGA.................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |