| Gene: Map4k1 | ID: uc009gam.1_intron_29_0_chr7_29787010_f | SPECIES: mm9 |
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(6) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| AGGCCTTCTGGAAGCATGGAGTTCAGGTGTGGGCTCCAGGCTTGAAACAGGTAGGCTCCTTCAGTTCACACCACTCCCTTGCCCTCATCCTCAACCTTCACATCCTTTAAATGGGCTTGGAGAAGCCCTGGGTCAGGACAGGGACTCGTGTAGGGAAGCTTCAGGGCACACATCGTACCGGCTCCCTGGTTCCTGACTTACCCACCCTTCACAGTTGCCTATCCGATAGGGCGCGGCGACTTTGCAGGTTAGTAGTCTTGGACACAGAGCAGTTAAGTCACATGTTTGTCAAAGTCACACAGCTTCATGAGTGGGTCTGGGGTTAGACTTACCCTGAGGAAGCCGTGTCTGTAGGGAGAGGGAAGGCCCTACTTCTCCGCACACACACAGACACACTTTCTCTACAGCCGCTGCAGGAGCTGAGAGACCCCACCCTCACCTTCCGTCTGCTCTGCTC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................................................................................................................................................TGAGGAAGCCGTGTCTGTAGGGAG................................................................................................... | 24 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................TGCAGGTTAGTAGTCTTGGACACAGAG............................................................................................................................................................................................ | 27 | 1 | 6.00 | 6.00 | - | - | 4.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................TGAGGAAGCCGTGTCTGTAGGG..................................................................................................... | 22 | 1 | 4.00 | 4.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................TGAGGAAGCCGTGTCTGTAGGGAGA.................................................................................................. | 25 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................TGCAGGTTAGTAGTCTTGGACACAGAGC........................................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................TGAGGAAGCCGTGTCTGTAGGGAGAG................................................................................................. | 26 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................TTACCCTGAGGAAGCCGTGTCTGTAGaaa.................................................................................................... | 29 | aaa | 3.00 | 2.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................GCCCTGGGTCAGGACAGGGACTCGTG................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................TTACCCTGAGGAAGCCGTGTCTGTAGa...................................................................................................... | 27 | a | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TGGAAGCATGGAGTTCAGGTGTGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGACCCCACCCTCACCTTCCGTCT......... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - |
| ........................................................................................................................................................................................................................................................................................................................................TTACCCTGAGGAAGCCGTGTCTGTAG....................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................TTGCAGGTTAGTAGTCTTGGACACAG.............................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TATCCGATAGGGCGCGGCGACTTTGC.................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGAAACAGGTAGGCTCCTTCAGTTC...................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................CTTCATGAGTGGGTCTGGGGTTA.................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCTGCAGGAGCTGAGAGACCC........................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................TACCCTGAGGAAGCCGTGT............................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........TGGAAGCATGGAGTTCAGGTGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................TGGACACAGAGCAGTTAAGTCACATGT............................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................TGAGGAAGCCGTGTCTGTAGGGAGAGG................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................TAGTAGTCTTGGACACAGAGCAGTT....................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................TGGACACAGAGCAGTTAAGTCACATG............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......CTGGAAGCATGGAGTTCAGGTGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................TTACCCTGAGGAAGCCGTGTCTGTAGtt..................................................................................................... | 28 | tt | 1.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................TGGACACAGAGCAGTTAAGTCACATGTTTGT........................................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................AGACACACTTTCTCTACAGCCGCTGCA.......................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCCGCTGCAGGAGCTGAGAGACC............................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCCGCTGCAGGAGCTGAGAGA.............................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................TACCCTGAGGAAGCCGTGTCTGga........................................................................................................ | 24 | ga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................................................................................................................................................................................................................................................................................................TACTTCTCCGCACACACACAGACACA.............................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................TGAGGAAGCCGTGTCTGTAGG...................................................................................................... | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................AGGGCGCGGCGACTTTGCAGG................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................TGGGCTCCAGGCTTGAAACAGGTAGG.................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| AGGCCTTCTGGAAGCATGGAGTTCAGGTGTGGGCTCCAGGCTTGAAACAGGTAGGCTCCTTCAGTTCACACCACTCCCTTGCCCTCATCCTCAACCTTCACATCCTTTAAATGGGCTTGGAGAAGCCCTGGGTCAGGACAGGGACTCGTGTAGGGAAGCTTCAGGGCACACATCGTACCGGCTCCCTGGTTCCTGACTTACCCACCCTTCACAGTTGCCTATCCGATAGGGCGCGGCGACTTTGCAGGTTAGTAGTCTTGGACACAGAGCAGTTAAGTCACATGTTTGTCAAAGTCACACAGCTTCATGAGTGGGTCTGGGGTTAGACTTACCCTGAGGAAGCCGTGTCTGTAGGGAGAGGGAAGGCCCTACTTCTCCGCACACACACAGACACACTTTCTCTACAGCCGCTGCAGGAGCTGAGAGACCCCACCCTCACCTTCCGTCTGCTCTGCTC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................CACCCTTCACAGTTGCCTATCCGATA..................................................................................................................................................................................................................................... | 26 | 1 | 13.00 | 13.00 | 5.00 | - | - | 7.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................GACACACTTTCTCTACAGCCGCTGCA.......................................... | 26 | 1 | 4.00 | 4.00 | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................CCACCCTTCACAGTTGCCTATCCGATA..................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TCCTCAACCTTCACATCCTTTAA........................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................AACAGGTAGGCTCCTTCAGTTCAC.................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................ACCCTTCACAGTTGCCTA............................................................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................GCACACACACAGACACACTTTCTCTA..................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................................................................................................TCTTGGACACAGAGCAGTTAAGTCACAT.............................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................ACACACACAGACACACTTTCTCTA..................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................ATGTTTGTCAAAGTCACACAGCTTCAa...................................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................ACTTACCCACCCTTCACAGTTGCCTA............................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................CAGACACACTTTCTCTACAGCCGCTGCAa.......................................... | 29 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................AGACACACTTTCTCTACAGCCGCTG............................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................GCGACTTTGCAGGTTAGTAGTCTTGGACA................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................................................................ACCCACCCTTCACAGTTGCCTATCCG........................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................GGCGCGGCGACTTTGCAGGTTAGTAGTCTT...................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................CATCCTCAACCTTCACATCCTTTAAA.......................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................CCTTGCCCTCATCCTCAACCTTCAC.................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................CAGAGCAGTTAAGTCA................................................................................................................................................................................. | 16 | 4 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |