| Gene: Cyp2t4 | ID: uc009fuz.1_intron_2_0_chr7_27940815_f | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(5) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| CTCCGGCCGCGGGGCCATGGCTGTCTTCGATCGCTTCACCTGCGGAAACGGTGAGGCCCAGGGTGGGTGGAAGTGAGTACTAGACCCCTCAACTTGGTCTAAGGACCAGTGAAGCCGAGCAAAATGGGAGGTGCCTAATAAAGAATGGTGCTAATGAGGACGAGCTATTAGGCCTGGGGTCCAGTAGAGGTTCACAATGTAACCAATAGCAGCCTAAATTCCTAAGCCCTAAGAGCTGGTCAGGGATCCTACCCTCAAAGATGTCAGGCTGCGTGGTTTCAGCTGAGGTGCTTGGCATATGGTCTGGGAAGTGCAAAGCAGTAAGAAGTCATCCTTAGAGCGGCAAGGAAGCGAGCGACTAGGCCCAGCGTGGCCAACTCTTTTTTTTTTTTTTTTTGGTTCCCACTGTAGGCATAGTGTTTTCTAACGGGCCGCGTTGGCACTCGCTTCGCAACTTTGCA ..................................................................................................................................................................................................................................(((...(((..(((.(((...)))))))))....(((((((((....((((....))))....))))))))).......)))......................................................................................................................................................... ................................................................................................................................................................................................................................225.....................................................................................313.................................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGGCATAGTGTTTTCTAACGGGC............................. | 26 | 1 | 13.00 | 13.00 | 10.00 | - | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TGGTCTGGGAAGTGCAAAGCAGTAAG........................................................................................................................................ | 26 | 1 | 8.00 | 8.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAAGGACCAGTGAAGCCGAGCAAAATGGG............................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TGGTCTGGGAAGTGCAAAGCAGTAAGAAG..................................................................................................................................... | 29 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................TAAGAGCTGGTCAGGGATCCTACCCTC............................................................................................................................................................................................................. | 27 | 1 | 4.00 | 4.00 | - | - | - | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TGGCTGTCTTCGATCGCTTCACCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TGGTCTGGGAAGTGCAAAGCAGTAAGA....................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................TAAGAGCTGGTCAGGGATCCTACCCT.............................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................TGGCATATGGTCTGGGAAGTGCAAAG............................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TAATAAAGAATGGTGCTAATGAGGACG........................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TGGCTGTCTTCGATCGCTTCACCTGCGG................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - |
| .................TGGCTGTCTTCGATCGCTTCACCTGCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................AGCTGAGGTGCTTGGCATATGGTCTGGGA........................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTTTTCTAACGGGCCGCGTTGGC.................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TCCTAAGCCCTAAGAGCTGGTCAGGGATac.................................................................................................................................................................................................................... | 30 | ac | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................GTCATCCTTAGAGCGGCAAGGAAGCGA........................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................TCCTTAGAGCGGCAAGGAAGCGAGCGAC...................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................TAAAGAATGGTGCTAATGAGGACGA.......................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TGGTCTGGGAAGTGCAAAGCAGTAAGAAGT.................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TGAAGCCGAGCAAAATGGGAGGTGC....................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCTGGGAAGTGCAAAGCAGTAAGAAGTC................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................ATGGTCTGGGAAGTGCAAAGCAGTAAGAAG..................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TGAGTACTAGACCCCTCAACTTGGTCT......................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................TCAAAGATGTCAGGCTGCGTGGTTTC..................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAAGGACCAGTGAAGCCGAGCAAAATGG.............................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................CTAAGCCCTAAGAGCTGGTCAGGGAT...................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................ATGGTCTGGGAAGTGCAAAGCAGTA.......................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAAGGACCAGTGAAGCCGAGCAAA.................................................................................................................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TCGATCGCTTCACCTGCGGAAACGGTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGGAGGTGCCTAATAAAGAATGGTGC...................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................TAAGAAGTCATCCTTAGAGCGGCAAG.................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAAGGACCAGTGAAGCCGAGCAAAAT................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TGGCTGTCTTCGATCGCTTCACCTtcgg................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | tcgg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TAATAAAGAATGGTGCTAATGAGG.............................................................................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................TGTCAGGCTGCGTGGTTTCAGCTGA............................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TAAAGAATGGTGCTAATGAGGACGtg......................................................................................................................................................................................................................................................................................................... | 26 | tg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................AATGAGGACGAGCTATTAGGCCTGGGG.......................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TCCTACCCTCAAAGATGTCAGGCTGCGTG.......................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................AAGAATGGTGCTAATGAGGACGAGCT....................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTAACGGGCCcgcc........................ | 18 | cgcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................................................................................................................................................................................................................................................................................................................TGGTTCCCACTGTAGGCATAGTGTTT....................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TGGGTGGAAGTGAGTACTAGACCCCTCA.................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TGAAGCCGAGCAAAATGGGAGGTGCC...................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TAATGAGGACGAGCTATTAGGCCTGG............................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TGGTCTGGGAAGTGCAAAGCAGTAAGAAGTC................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TAAGGACCAGTGAAGCCGAGCAAAATGt.............................................................................................................................................................................................................................................................................................................................................. | 28 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................TTCAGCTGAGGTGCTTGGCATATGGTC............................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TAAATTCCTAAGCCCTAAGAGCTGGTCAGG......................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................GTGAAGCCGAGCAAAATGGGAGGTGCC...................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTCCGGCCGCGGGGCCATGGCTGTCTTCGATCGCTTCACCTGCGGAAACGGTGAGGCCCAGGGTGGGTGGAAGTGAGTACTAGACCCCTCAACTTGGTCTAAGGACCAGTGAAGCCGAGCAAAATGGGAGGTGCCTAATAAAGAATGGTGCTAATGAGGACGAGCTATTAGGCCTGGGGTCCAGTAGAGGTTCACAATGTAACCAATAGCAGCCTAAATTCCTAAGCCCTAAGAGCTGGTCAGGGATCCTACCCTCAAAGATGTCAGGCTGCGTGGTTTCAGCTGAGGTGCTTGGCATATGGTCTGGGAAGTGCAAAGCAGTAAGAAGTCATCCTTAGAGCGGCAAGGAAGCGAGCGACTAGGCCCAGCGTGGCCAACTCTTTTTTTTTTTTTTTTTGGTTCCCACTGTAGGCATAGTGTTTTCTAACGGGCCGCGTTGGCACTCGCTTCGCAACTTTGCA ..................................................................................................................................................................................................................................(((...(((..(((.(((...)))))))))....(((((((((....((((....))))....))))))))).......)))......................................................................................................................................................... ................................................................................................................................................................................................................................225.....................................................................................313.................................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGGCCGCGTTGGCACTCGCTTCGCA........ | 29 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................GCAGTAAGAAGTCATCCTTAGAGCGGCA.................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GGCTGTCTTCGATCGCTTCACCTGCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................GCCTGGGGTCCAGTAGAGGTTCACA......................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................GAGCTGGTCAGGGATCCTACCCTCAAA.......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................ACCCCTCAACTTGGTCTAAGGACCAGT............................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................GCAAAGCAGTAAGAAGTCATCCTTAGA.......................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................CTCAAAGATGTCAGGCTGCGTGGTTTCA.................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................CTAGGCCCAGCGTGgat......................................................................................... | 17 | gat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |