| Gene: Axl | ID: uc009ftx.1_intron_18_0_chr7_26572536_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(3) PIWI.mut |
(21) TESTES |
| CAGACTGGACATGAGATGGAAGCCGGACCTCAATCCCCTGGGAAGACTCCTATCCTCTCCCATGCCTCCACCCCACCCCCCTCTGAGGTCACTCTACAACTATGTGGGGTCCTGGCAACCATGGGCAGATAGGGAAGGTGGACCAGAGGAGCAGCGAGCTGCGGGTTTCCTAACCATGCTCCTTACCATCTCCCTGACAGACACACAGACCGAGGCTGGCAGCCCGTTTGTGGGGAACCCAGGGAATATC .................................................................................................................................(((((.((((((....(((((((.((.....)).((((....))))..))))))).)))))))))))...................................................... ...........................................................................................................................124.........................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................TAGGGAAGGTGGACCAGAGGAGC.................................................................................................. | 23 | 1 | 18.00 | 18.00 | - | 7.00 | - | 10.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAGC.................................................................................................. | 24 | 1 | 12.00 | 12.00 | 10.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGA.................................................................................................... | 22 | 1 | 10.00 | 10.00 | - | 5.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAGCA................................................................................................. | 25 | 1 | 8.00 | 8.00 | 4.00 | - | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................TAGGGAAGGTGGACCAGAGGAGCAa................................................................................................ | 25 | a | 8.00 | 2.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAGCAt................................................................................................ | 26 | t | 7.00 | 8.00 | 6.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAG................................................................................................... | 23 | 1 | 6.00 | 6.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TGACAGACACACAGACCGAGGCTGGCAGC........................... | 29 | 1 | 5.00 | 5.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TAGGGAAGGTGGACCAGAGGAG................................................................................................... | 22 | 1 | 5.00 | 5.00 | - | - | - | - | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGGACCAGAGGAGCAGCG.............................................................................................. | 18 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TAGGGAAGGTGGACCAGAGGAGCAt................................................................................................ | 25 | t | 3.00 | 2.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGG..................................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAaa..................................................................................................... | 21 | aa | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TAGGGAAGGTGGACCAGAGGAGa.................................................................................................. | 23 | a | 2.00 | 5.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAa................................................................................................... | 23 | a | 2.00 | 10.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGA....................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TAGGGAAGGTGGACCAGAGGAGCA................................................................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAGCAtt............................................................................................... | 27 | tt | 1.00 | 8.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................CGTTTGTGGGGAACCCAGG....... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGggc.................................................................................................. | 24 | ggc | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................AGGGAAGGTGGACCAGAGGAGCAGCG.............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TATGTGGGGTCCTGGCAACCATGGGCAGA......................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAGCAaa............................................................................................... | 27 | aa | 1.00 | 8.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................TTGTGGGGAACCCAGGGA..... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TAGGGAAGGTGGACCAGAGGAat.................................................................................................. | 23 | at | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................TGGGCAGATAGGGAAGGTGGACCAGA....................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAat.................................................................................................. | 24 | at | 1.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAa...................................................................................................... | 20 | a | 1.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..GACTGGACATGAGATGGAAGCCGGACCTC........................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................TCCCATGCCTCCACCCCACCCCCCctgt..................................................................................................................................................................... | 28 | ctgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....TGGACATGAGATGGAAGCC.................................................................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............AGATGGAAGCCGGACCacca......................................................................................................................................................................................................................... | 20 | acca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATAGGGAAGGTGGACCAGAGGAGt.................................................................................................. | 24 | t | 1.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................................................................................................................................................................................................................................TGTGGGGAACCCAGGGAA.... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................AACCATGGGCAGATAGGGAAGGaaa............................................................................................................. | 25 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| CAGACTGGACATGAGATGGAAGCCGGACCTCAATCCCCTGGGAAGACTCCTATCCTCTCCCATGCCTCCACCCCACCCCCCTCTGAGGTCACTCTACAACTATGTGGGGTCCTGGCAACCATGGGCAGATAGGGAAGGTGGACCAGAGGAGCAGCGAGCTGCGGGTTTCCTAACCATGCTCCTTACCATCTCCCTGACAGACACACAGACCGAGGCTGGCAGCCCGTTTGTGGGGAACCCAGGGAATATC .................................................................................................................................(((((.((((((....(((((((.((.....)).((((....))))..))))))).)))))))))))...................................................... ...........................................................................................................................124.........................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................CACCCCACCCCCCTCttta....................................................................................................................................................................... | 19 | ttta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................CACACAGACCGAGGCgg.................................. | 17 | gg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................ACCATCTCCCTGACAGACACACAGA......................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |