| Gene: BC049730 | ID: uc009fqj.1_intron_5_0_chr7_25498803_f | SPECIES: mm9 |
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(6) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) TDRD1.ip |
(23) TESTES |
| GTGCCCTAAGGACACGAAATGCTATGCAGCTTCCTTGGGAGTGCATGGAGGTAAGGGATGAGGCTGCCTTCCCAGGATGGAGGAGACTGTGGCCATGACTCCAGCGCCTCAGGAGGAGGGATGAAGTCTCCTGGCTCTGAGGGAGGTGTGCAGAGGCCTGGACTGCTGTTGCAGAGGGAGTGTGGCTGGAGAGTATAACCCTGGGTGTGAGGAGGGAGGAGTCCTGCGCCTGGACCAAGACTCCTGGGTCACTGGGGAGGGCTGGAGCCTGGACTCTTGGGTATGAATTTTTTTAAAGCTTTCCTGAACTATGCCTCCTGTCCCTTGCCCCTGACTTGATCTTTATCTTCTAGGTGACCTCAGTGCCATTTTTAGCATTTCTGGATGCCTGAACTCATCTCAT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................................CCTGCGCCTGGACCAAGACTCCTGGGTCACTGGGGAGGGCTGGAGCCTGGAC................................................................................................................................. | 52 | 2 | 43.50 | 43.50 | 43.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TGCTATGCAGCTTCCTTGGGAGTGCATG.................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 9.00 | 9.00 | - | 2.00 | - | - | - | 3.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TAAGGACACGAAATGCTATGCAGCTTC.................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 6.00 | 6.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | - | - |
| ......TAAGGACACGAAATGCTATGCAGCTT................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 5.00 | 5.00 | - | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCCTGAACTCATCTC.. | 21 | 1 | 4.00 | 4.00 | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TGCTATGCAGCTTCCTTGGGAGTGCATGt................................................................................................................................................................................................................................................................................................................................................................... | 29 | t | 4.00 | 9.00 | - | 2.00 | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................GAGACTGTGGCCATGACTCCAG........................................................................................................................................................................................................................................................................................................... | 22 | 2 | 3.50 | 3.50 | - | - | - | 3.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................TTTTAGCATTTCTGGATGCCTGAACTCATC.... | 30 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................AGTGCCATTTTTAGCATTTCTGGATGCCTGt........... | 31 | t | 2.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TAAGGACACGAAATGCTATGCAGCTTCC................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TAAGGACACGAAATGCTATGCAGC..................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TAGCATTTCTGGATGCCTGAACTCATC.... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................CCCTTGCCCCTGACTTGATCTTTATCTTCTAGa................................................. | 33 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGGATGCCTGAACTCATC.... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................TTTCTGGATGCCTGAAtag....... | 19 | tag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................TGCCATTTTTAGCATTTCTGGATGCCTG............ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TAGCATTTCTGGATGCCTGAACTCATa.... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................TATGCAGCTTCCTTGGGAGTGCATG.................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TGCCCTAAGGACACGAAA................................................................................................................................................................................................................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................TGCTATGCAGCTTCCTTGGGAGTGCATGG................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TAGCATTTCTGGATGCCTGAACTCATCT... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGGATGCCTGAACTCATCTt.. | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TATGCAGCTTCCTTGGagtg......................................................................................................................................................................................................................................................................................................................................................................... | 20 | agtg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TGCTATGCAGCTTCCTTGGGAGTG........................................................................................................................................................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TAGCATTTCTGGATGCCTGAACTC....... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......TAAGGACACGAAATGCTATGCAGCTTCCT................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TAGCATTTCTGGATGCCTGAACTCATCTC.. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TAGCATTTCTGGATGCCTGAACTCATCTCt. | 30 | t | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................TTAGCATTTCTGGATGCCTGAACTCATCT... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TGCTGTTGCAGAGGGAGTGTGGCT........................................................................................................................................................................................................................ | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| .................................................................................................................................................GTGTGCAGAGGCCTGGAC................................................................................................................................................................................................................................................ | 18 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GTGCCCTAAGGACACGAAATGCTATGCAGCTTCCTTGGGAGTGCATGGAGGTAAGGGATGAGGCTGCCTTCCCAGGATGGAGGAGACTGTGGCCATGACTCCAGCGCCTCAGGAGGAGGGATGAAGTCTCCTGGCTCTGAGGGAGGTGTGCAGAGGCCTGGACTGCTGTTGCAGAGGGAGTGTGGCTGGAGAGTATAACCCTGGGTGTGAGGAGGGAGGAGTCCTGCGCCTGGACCAAGACTCCTGGGTCACTGGGGAGGGCTGGAGCCTGGACTCTTGGGTATGAATTTTTTTAAAGCTTTCCTGAACTATGCCTCCTGTCCCTTGCCCCTGACTTGATCTTTATCTTCTAGGTGACCTCAGTGCCATTTTTAGCATTTCTGGATGCCTGAACTCATCTCAT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................................................................................................ATGCCTCCTGTCCCTggc.............................................................................. | 18 | ggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................CTTGCCCCTGACTTGATCTTTATCTTCTAt................................................... | 30 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................GCTGCCTTCCCAGGATtt..................................................................................................................................................................................................................................................................................................................................... | 18 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |