(5)
OTHER.mut
(1)
OVARY
(2)
PIWI.ip
(1)
PIWI.mut
(20)
TESTES

Sense strand
CACCAATGCCCTAGGGTCTGGGCAGGGCCAAGTGCACATCATTGTTAAAGGTGAGTAGTCAGTCCTCAGACAAGAAGGAGAGGGTACAGGAGGGTGGCCCTTAGCAGTGGGATGTGGGTGGGGTGGCCAAGAATGACAGCAAGTCGTAGGTCGCAGACTTCGCCAGCCCAGTCTGGGGCAGGTGTGGGAAACCTCTGACCAAGGAATGTAATAAGGAGTTTTCTGTAAGCGCATGTCTTTCCTCTCAGCT
.................................................(((((..((((..(((.((..((.....(((.((.(((......))).))))).....))...)).)))....((((((....(((((.....))))).)))))).)))))))))......................................................................................
..............................................47....................................................................................................................165...................................................................................
Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR014234(GSM319958)
Ovary total. (ovary)
mjTestesWT1()
Testes Data. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGACTTC......................................................................................... 28 1 8.00 8.00 7.00 - - - - - - - - - 1.00 - - - - - - - - - -
.........................................................................................................................................................................................................AGGAATGTAATAAGGAGTTTTCTGTAAGC.................... 29 1 6.00 6.00 - 2.00 1.00 - 3.00 - - - - - - - - - - - - - - - -
...........TAGGGTCTGGGCAGGGCCAAGTGC....................................................................................................................................................................................................................... 24 1 6.00 6.00 - - - 6.00 - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................AGGAATGTAATAAGGAGTTTTCTGTAAGCG................... 30 1 4.00 4.00 - 1.00 - - - - - - - - - 3.00 - - - - - - - - -
.........................................................................................................................................................................................................AGGAATGTAATAAGGAGTTTTCTGTAAGCGC.................. 31 1 3.00 3.00 - 2.00 - - - - 1.00 - - - - - - - - - - - - - -
.............................................TAAAGGTGAGTAGTCAGTCCTCAGACAAGAA.............................................................................................................................................................................. 31 1 3.00 3.00 - 3.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TAATAAGGAGTTTTCTGTAAGCGCATG............... 27 1 2.00 2.00 - - 1.00 - - - - - - - - - - - - 1.00 - - - - -
...................................................................................................................................AATGACAGCAAGTCGTAGGTCGCAGACTTC......................................................................................... 30 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - -
..................TGGGCAGGGCCAAGTGCACATCATTGTTA........................................................................................................................................................................................................... 29 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGC................................................................................................ 21 1 2.00 2.00 - - - - - - - - 2.00 - - - - - - - - - - - -
............................................................................................................................................................................................................AATGTAATAAGGAGTTTTCTGTAAGCGC.................. 28 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - -
............................................TTAAAGGTGAGTAGTCAGTCCTCAGA.................................................................................................................................................................................... 26 1 2.00 2.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
..........................................................................................................................................GCAAGTCGTAGGTCGCAGA............................................................................................. 19 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................GAATGTAATAAGGAGTTTTCTGTAAGC.................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - -
.................................................................................................................................................GTAGGTCGCAGACTTCGCCAGCCCAGT.............................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - -
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGACT........................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................TAGCAGTGGGATGTGGGTGGGGTa............................................................................................................................. 24 a 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - -
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGAC............................................................................................ 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
...................................................TGAGTAGTCAGTCCTCAGACAAGAAGG............................................................................................................................................................................ 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................TGAGTAGTCAGTCCTCAGACAAGAAGGA........................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - -
...................................................................................................................................................................................................TGACCAAGGAATGTAATAAGGAGTTTT............................ 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - -
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGcctt.......................................................................................... 27 cctt 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - -
....................................................................................................................................ATGACAGCAAGTCGTAGGTCGCAGACTTC......................................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................ATCATTGTTAAAGGTGAGTAGTCAGTCC......................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGAtttc......................................................................................... 28 tttc 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TGACCAAGGAATGTAATAAGGAGT............................... 24 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TAATAAGGAGTTTTCTGTAAGCGCAT................ 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
...............................................AAGGTGAGTAGTCAGTCCTCAGACAAGAAG............................................................................................................................................................................. 30 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
...........TAGGGTCTGGGCAGGGCCAAGTGCACAaa.................................................................................................................................................................................................................. 29 aa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGACTT.......................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................GTAGGTCGCAGACTTCGCCAGC................................................................................... 22 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TGTAATAAGGAGTTTTCTGTAAGCGC.................. 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................AGGAATGTAATAAGGAGTTTTCTGTAA...................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
..................................................................CAGACAAGAAGGAGAGGGTACAGGAGG............................................................................................................................................................. 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................AGTCCTCAGACAAGAAGGAGAGGGTACA.................................................................................................................................................................. 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................GAATGTAATAAGGAGTTTT............................ 19 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - -
...........................................................................................................................TGGCCAAGAATGACAGCAAGTCGTAGGT................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - -
.......................................................................................................................................ACAGCAAGTCGTAGGTCGCAGACTTCGC....................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................TCAGTCCTCAGACAAGAAGGAGAGG....................................................................................................................................................................... 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
................................................................................................GCCCTTAGCAGTGGGATGTGGGTGG................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - -
.........................................TTGTTAAAGGTGAGTAGTCAGTCCTCAG..................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................TGTTAAAGGTGAGTAGTCAGTCCTC....................................................................................................................................................................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................ATCATTGTTAAAGGTGAGTAGTCAGT........................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - -
.....................................ATCATTGTTAAAGGTGAGTAGTCAGTCCT........................................................................................................................................................................................ 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - -
............................................TTAAAGGTGAGTAGTCAGTCCTCAGACAA................................................................................................................................................................................. 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - -
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGACTTCG........................................................................................ 29 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - -
.........................................TTGTTAAAGGTGAGTAGTCAGTCCTC....................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TGACCAAGGAATGTAATAAGGAGTTTTC........................... 28 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - -
..................................................................................................................................................................................CAGGTGTGGGAAACgttt...................................................... 18 gttt 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGACTTCGC....................................................................................... 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................GCAGTGGGATGTGGaccc................................................................................................................................. 18 accc 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 -
..........................................TGTTAAAGGTGAGTAG................................................................................................................................................................................................ 16 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................TGAGTAGTCAGTCCTCAGACAAGAAGGAG.......................................................................................................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
...................................................................................................................................AATGACAGCAAGTCGTAGGTCGCAGACTT.......................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
...CAATGCCCTAGGGTCTGGtga.................................................................................................................................................................................................................................. 21 tga 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................TGACAGCAAGTCGTAGGTCGCAGACctc......................................................................................... 28 ctc 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TGACCAAGGAATGTAATA..................................... 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -

Antisense strand
CACCAATGCCCTAGGGTCTGGGCAGGGCCAAGTGCACATCATTGTTAAAGGTGAGTAGTCAGTCCTCAGACAAGAAGGAGAGGGTACAGGAGGGTGGCCCTTAGCAGTGGGATGTGGGTGGGGTGGCCAAGAATGACAGCAAGTCGTAGGTCGCAGACTTCGCCAGCCCAGTCTGGGGCAGGTGTGGGAAACCTCTGACCAAGGAATGTAATAAGGAGTTTTCTGTAAGCGCATGTCTTTCCTCTCAGCT
.................................................(((((..((((..(((.((..((.....(((.((.(((......))).))))).....))...)).)))....((((((....(((((.....))))).)))))).)))))))))......................................................................................
..............................................47....................................................................................................................165...................................................................................
Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR014234(GSM319958)
Ovary total. (ovary)
mjTestesWT1()
Testes Data. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
...............................................................................................................................................TCGTAGGTCGCAGACTTCGCCAGCCCA................................................................................ 27 1 15.00 15.00 - 6.00 1.00 5.00 1.00 - 2.00 - - - - - - - - - - - - - -
..............................................................................................................................................GTCGTAGGTCGCAGACTTCGCCAGCCCA................................................................................ 28 1 11.00 11.00 1.00 3.00 - 3.00 - - 2.00 - - 2.00 - - - - - - - - - - -
.............................................................................................................................................................................................................................TCTGTAAGCGCATGTCTTTCCTCTCA... 26 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................GTCGTAGGTCGCAGACTTCGCCAGCCCAa................................................................................ 29 a 2.00 0.00 - - 2.00 - - - - - - - - - - - - - - - - - -
...................................ACATCATTGTTAAAGGTGAGTAGTCA............................................................................................................................................................................................. 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - -
................................................AGGTGAGTAGTCAGTCCTCAGACAAGAA.............................................................................................................................................................................. 28 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - -
...................GGGCAGGGCCAAGTGCACATCATTGTTA........................................................................................................................................................................................................... 28 1 2.00 2.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - -
..................................................................................GGTACAGGAGGGTGGCCCTTAGCA................................................................................................................................................ 24 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - -
..............................................................................................................................................................................................ACCTCTGACCAAGGAATGTAATAAGG.................................. 26 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - -
.........................................................................................................................................................................................................................GTTTTCTGTAAGCGCATGTCTTTCCTCTCA... 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................................................AAGAATGACAGCAAGTCGTAGGTCGCA............................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................GAGTTTTCTGTAAGCGCATGTCTTTCCTC...... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................AGTAGTCAGTCCTCAGACAAG................................................................................................................................................................................ 21 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................ATGTAATAAGGAGTTTTCTGTAAGCGCA................. 28 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - -
........................................ATTGTTAAAGGTGAGTAGTCAGTCCTC....................................................................................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................................................................................................AGGTCGCAGACTTCGCCAGCCCAGTC............................................................................. 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................GAGTAGTCAGTCCTCAGACAA................................................................................................................................................................................. 21 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................AGACTTCGCCAGCCCAGTCTGGGGCA...................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................CAGACTTCGCCAGCCCAGTCTGGGGCAt...................................................................... 28 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................TAGGTCGCAGACTTCGCCAGCCCAt................................................................................ 25 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - -
...........................................................................................................................................CAAGTCGTAGGTCGCAGACTTCGCCA..................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................GTGTGGGAAACCTCTGACCAAGGAATGT......................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - -
....................................................................................................................................................................................................................AAGGAGTTTTCTGTAAGCGCATGTCT............ 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................................GGTGGCCAAGAATGACAGCAAGTCGTA...................................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - -
..............................................................................................................................................................................................ACCTCTGACCAAGGAATGTAATAAGGA................................. 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - -
.................................................................................................................................AGAATGACAGCAAGTCGTAGGTCGCA............................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - -
..................................................................................................................................................................................CAGGTGTGGGAAACCTCTGACCAAGGA............................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................CCAAGAATGACAGCAAGTCGTAGGTCGCA............................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................GGGGTGGCCAAGAATGACAGCAAGTCG........................................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................GGCAGGTGTGGGAAACCTCTGACCAAGGA............................................. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................AGTCGTAGGTCGCAGACTTCGCCAGCCCA................................................................................ 29 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................................GCCAAGAATGACAGCAAGTCGTAGGTCGCA............................................................................................... 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.ACCAATGCCCTAGGG.......................................................................................................................................................................................................................................... 15 10 0.20 0.20 - - 0.10 - - - - - - - - - 0.10 - - - - - - - -