| Gene: mKIAA1860 | ID: uc009flx.1_intron_14_0_chr7_20033824_r | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| CTATTAAGATCATTGATAAGACCCAGCTGAACCCCAGTAGCTTGCAGAAGGTGAGGCCCAGAGAAAGGACCAGGGTGGGAACACAGTGCTGGGTGAGAGCTGGGACCCGACCAGGCCTGGCAGGGGAGGGAGCCCCACCCCACTCACAACTGTCTGCTCTTCCTTCCTGGCCTTGCCCAGCTGTTCAGAGAAGTCCGAATTATGAAGGGACTCAACCACCCCAACATCGG ........................................................(((((........((((.(((....)))....)))).......))))).(((..((..((...))..))..))).................................................................................................... ..................................................51..............................................................................131................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGGCCCAGAGAAAGGACCAGGGT.......................................................................................................................................................... | 26 | 1 | 7.00 | 7.00 | 5.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGCCCAGAGAAAGGACCAGGG........................................................................................................................................................... | 25 | 1 | 5.00 | 5.00 | - | 3.00 | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................GTGAGGCCCAGAGAAAGGACCAGG............................................................................................................................................................ | 24 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGCCCAGAGAAAGGACCAGGGTGGGA...................................................................................................................................................... | 30 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGGGACCCGACCAGGCCTGGCAGGGGA....................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGCCCAGAGAAAGGACCAGcgc.......................................................................................................................................................... | 26 | cgc | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................CTGGGTGAGAGCTGGGACCCGACC...................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGCCCAGAGAAAGGACCAGGGTG......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................GTGAGGCCCAGAGAAAGGACCAG............................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGCCCAGAGAAAGGACCAGGGgg......................................................................................................................................................... | 27 | gg | 1.00 | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGGCCCAGAGAAAGGACCAGGGT.......................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................TGTCTGCTCTTCCTatca.............................................................. | 18 | atca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......AGATCATTGATAAGACCCAGCTGAA....................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................CCAGAGAAAGGACCcact........................................................................................................................................................... | 18 | cact | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................ACAACTGTCTGCTCTTCCTTCCTGGCCTT........................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................CCAGAGAAAGGACCAGGGTGGGAACAC.................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................ATGAAGGGACTCAACCACCCCAACATCG. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................ACACAGTGCTGGGTGAGAGCTGGGAC............................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TTGATAAGACCCAGCTGAACCCC................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................AGAAAGGACCAGGGTG......................................................................................................................................................... | 16 | 7 | 0.14 | 0.14 | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTATTAAGATCATTGATAAGACCCAGCTGAACCCCAGTAGCTTGCAGAAGGTGAGGCCCAGAGAAAGGACCAGGGTGGGAACACAGTGCTGGGTGAGAGCTGGGACCCGACCAGGCCTGGCAGGGGAGGGAGCCCCACCCCACTCACAACTGTCTGCTCTTCCTTCCTGGCCTTGCCCAGCTGTTCAGAGAAGTCCGAATTATGAAGGGACTCAACCACCCCAACATCGG ........................................................(((((........((((.(((....)))....)))).......))))).(((..((..((...))..))..))).................................................................................................... ..................................................51..............................................................................131................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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| ...................................................................................................................................................................................GCTGTTCAGAGAAGTCC.................................. | 17 | 3 | 0.33 | 0.33 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - |