| Gene: Ckm | ID: uc009flu.1_intron_4_0_chr7_20002240_f.5p | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(1) PIWI.mut |
(13) TESTES |
| CTGCTGGCCTCAGGCATGGCCCGAGACTGGCCCGATGCCCGTGGCATCTGGTGAGTCCCTCCTTTCTCCAGATCCTCCGGCCCTCTGACCCTTCAATCGCAGGAGACTTTCTATGGGTTAAAATAGGGTCCCTAGTCCGGTCCACCACAGGGTTAGGGCCATTCATGAAGGCGGATGTGGGAGGCTTGACTGCACGCACCCCACGTGGCCACTGGGGTGGGGGGTGAAGTGTTGGGCTGTGAGAAGCCAC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................TGAAGGCGGATGTGGGAGGCTTGAC............................................................ | 25 | 1 | 21.00 | 21.00 | 20.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................TTCATGAAGGCGGATGTGGGAGGC................................................................. | 24 | 1 | 13.00 | 13.00 | 9.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAAGGCGGATGTGGGAGGCTTGA............................................................. | 24 | 1 | 9.00 | 9.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAAGGCGGATGTGGGAGGCTTGACTGC......................................................... | 28 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAAGGCGGATGTGGGAGGCTTGACT........................................................... | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................AGGCGGATGTGGGAGGCTTGACTGC......................................................... | 25 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TAGGGCCATTCATGAAGGCGGATGTG....................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................TAGGGCCATTCATGAAGGCGGATGTGGG..................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................TCATGAAGGCGGATGTGGGAGGC................................................................. | 23 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAAGGCGGATGTGGGAGGCa................................................................ | 21 | a | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAAGGCGGATGTGGGAGGCTTGAa............................................................ | 25 | a | 2.00 | 9.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| ...........................................................TCCTTTCTCCAGATCCTCCGGCCCTCT.................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................TTCATGAAGGCGGATGTGGGAGGCT................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................TGAAGGCGGATGTGGGAGG.................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| CTGCTGGCCTCAGGCATGGCCCGAGACTGGCCCGATGCCCGTGGCATCTGGTGAGTCCCTCCTTTCTCCAGATCCTCCGGCCCTCTGACCCTTCAATCGCAGGAGACTTTCTATGGGTTAAAATAGGGTCCCTAGTCCGGTCCACCACAGGGTTAGGGCCATTCATGAAGGCGGATGTGGGAGGCTTGACTGCACGCACCCCACGTGGCCACTGGGGTGGGGGGTGAAGTGTTGGGCTGTGAGAAGCCAC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................ATCTGGTGAGTCCCTCCTTTCTCCA.................................................................................................................................................................................... | 25 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................GATCCTCCGGCCCTCTGACCCTTCA........................................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................CCGGCCCTCTGACCCTTCAATCGCA..................................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCCACCACAGGGTTAGGGCCATTCATGA.................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................ATCTGGTGAGTCCCTCCTTTCTCCAaaa.................................................................................................................................................................................... | 28 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................GGCATCTGGTGAGTCCCTCCTTTCT....................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................CCTAGTCCGGTCCACCACAGGGTTA............................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................CTTTCTCCAGATCCTCCGGCCCTCa..................................................................................................................................................................... | 25 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................GGCATCTGGTGAGTCCCTCCTTTCTC...................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................GCCCTCTGACCCTTCAATCGCAagg..................................................................................................................................................... | 25 | agg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................ATCCTCCGGCCCTCTGACCCTTCAa........................................................................................................................................................... | 25 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................GTGGCATCTGGTGAGTCCCTCCTTTC........................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................CTCCGGCCCTCTGACCCTTCAATCGCAG.................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................TCTGGTGAGTCCCTCCTTTCTCCA.................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................GGCCCTCTGACCCTTCAATCGCAGGA.................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................CATCTGGTGAGTCCCTCCTTTCTCCA.................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................CTCCAGATCCTCCGGCttcg......................................................................................................................................................................... | 20 | ttcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................TCCGGCCCTCTGACCCTTCAATCGCA..................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |