| Gene: Dmpk | ID: uc009fkn.1_intron_3_0_chr7_19671934_f | SPECIES: mm9 |
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(7) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(21) TESTES |
| GGCGCTGGATCACACAGCTGCACTTTGCCTTCCAGGATGAGAACTACCTGGTAAGCTCCGGGTTCAGGTGACTAGGAAAGAGTGACAGTTACATCGCCCCAAGTCAAGAAGGCTGGAGAAGGGAGAAGCTGCTGTAGATCGGGGGGGTGGGGGTGGGGGGGACACACACAGGGGATGGGGGACGGGGGTAGGATTGTGTCTCAAGTATAGGAGAGACCTTCCTTGAGACAGGAGTGATATCTGGTTTGGCCTTTGGATGGGGCGCTCTCTCACTGTGCGGGGGTCCTCTGTGCTTGGGAACGGGGTGTCTTTGGGAGTCTTGGGGGCTACCAAACCCCTGTGACACACCCGCTCCCAGTACCTGGTCATGGAATACTACGTGGGCGGGGACCTGCTAACGCTGCTGAG ......................................................................................................................................................................................................................................................................................................(((((.(((((((((...(((.((.((((......)))))))))...))))).)))).)))))................................................... ................................................................................................................................................................................................................................................................................................289..................................................................358................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................................................................................................TTGGGAACGGGGTGTCTTTGG.............................................................................................. | 21 | 1 | 6.00 | 6.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................CTGTGACACACCCGCTCCCAGT................................................. | 22 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................................................................................................................................................TTGGGAACGGGGTGTCTTTGGG............................................................................................. | 22 | 1 | 4.00 | 4.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................................................................................................................................................TGTGACACACCCGCTCCCAGT................................................. | 21 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................TTGGGAACGGGGTGTCTTTGGGtat.......................................................................................... | 25 | tat | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........CACACAGCTGCACTTTGCCTTCCAGGA................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................TTGGGAACGGGGTGTCTTTG............................................................................................... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................GGGGGTAGGATTGTGggt............................................................................................................................................................................................................... | 18 | ggt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................TTGGGAACGGGGTGTCTTTGGGAag.......................................................................................... | 25 | ag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................................................................................................................................................................CTGTGACACACCCGCTCCCAG.................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................CACTTTGCCTTCCAGGATGAGAACTACC........................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................TGGTCATGGAATACTACGTGGGCGGG.................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................CTTGGGAACGGGGTGTCTTTG............................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................TTGGGAACGGGGTGTCTTTGGGAa........................................................................................... | 24 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................TTGGGAACGGGGTGTCTTTGGa............................................................................................. | 22 | a | 1.00 | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................CTGTGACACACCCGCTCCCAta................................................. | 22 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................ACTTTGCCTTCCAGGATGAGAACTACCT....................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................AGGATGAGAACTACCTGa..................................................................................................................................................................................................................................................................................................................................................................... | 18 | a | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................AGGATGAGAACTACCTG...................................................................................................................................................................................................................................................................................................................................................................... | 17 | 4 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................GGATGAGAACTACCTG...................................................................................................................................................................................................................................................................................................................................................................... | 16 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................CAGGATGAGAACTACCTG...................................................................................................................................................................................................................................................................................................................................................................... | 18 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................GATGAGAACTACCTG...................................................................................................................................................................................................................................................................................................................................................................... | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGCGCTGGATCACACAGCTGCACTTTGCCTTCCAGGATGAGAACTACCTGGTAAGCTCCGGGTTCAGGTGACTAGGAAAGAGTGACAGTTACATCGCCCCAAGTCAAGAAGGCTGGAGAAGGGAGAAGCTGCTGTAGATCGGGGGGGTGGGGGTGGGGGGGACACACACAGGGGATGGGGGACGGGGGTAGGATTGTGTCTCAAGTATAGGAGAGACCTTCCTTGAGACAGGAGTGATATCTGGTTTGGCCTTTGGATGGGGCGCTCTCTCACTGTGCGGGGGTCCTCTGTGCTTGGGAACGGGGTGTCTTTGGGAGTCTTGGGGGCTACCAAACCCCTGTGACACACCCGCTCCCAGTACCTGGTCATGGAATACTACGTGGGCGGGGACCTGCTAACGCTGCTGAG ......................................................................................................................................................................................................................................................................................................(((((.(((((((((...(((.((.((((......)))))))))...))))).)))).)))))................................................... ................................................................................................................................................................................................................................................................................................289..................................................................358................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........CACACAGCTGCACTTTGCCTTCCAGGA................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |