| Gene: Dmwd | ID: uc009fkk.1_intron_1_0_chr7_19663587_f.3p | SPECIES: mm9 |
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(1) OTHER.ip |
(1) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(22) TESTES |
| TGGCAGTGAAGACAGAGCCACAGTTAAGTGGGTGGAGGATAATGGAGGCTCCATGGAGCTCTTCACTGGCAGCCCTTCCCAGTATCCCTGTGCCACCTGCCTTCTGTCTCAGTCAGTGGGAGAGCTGGGGTCCAGGATAAGATGTGGCCTGTCAGGAGTACTCACCACTTCCCAACCCCACCCTGGTGTTCCCTTTGCAGCGGCTGATTGACAAGACCAAGGTGACATATTTGAAGTGGCTGCCTGAGTC .......................................................(((..(((..(((((((.((.......(((.((((..((.((.((((((((.((.....)))))))).)).))))..)))))))......)).))))))))))..)))....................................................................................... ................................................49....................................................................................................................167................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................TAAGATGTGGCCTGTCAGGAGTACTC....................................................................................... | 26 | 1 | 9.00 | 9.00 | - | - | - | - | - | 2.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................................................................................................................................................................CAAGACCAAGGTGACATATTTGAAGT............. | 26 | 1 | 6.00 | 6.00 | 2.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCCCTTTGCAGCGGCTGATTGACAAGAC................................. | 28 | 1 | 5.00 | 5.00 | - | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGACAAGACCAAGGTGACATATTTGAAGT............. | 29 | 1 | 5.00 | 5.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................GGCTGATTGACAAGACCAAGGTGACAT...................... | 27 | 1 | 5.00 | 5.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TGGTGTTCCCTTTGCAGCGGCTGATTG........................................ | 27 | 1 | 5.00 | 5.00 | - | 3.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CAAGACCAAGGTGACATATTTGAAGTG............ | 27 | 1 | 4.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCCCTTTGCAGCGGCTGATTGACAAG................................... | 26 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGACATATTTGAAGTGGCTGCCTGAGT. | 27 | 1 | 4.00 | 4.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGACATATTTGAAGTGGCTGCCTGAG.. | 26 | 1 | 4.00 | 4.00 | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................................................................................TAAGATGTGGCCTGTCAGGAGTACT........................................................................................ | 25 | 1 | 3.00 | 3.00 | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGACAAGACCAAGGTGACATA..................... | 21 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GCGGCTGATTGACAAGACCAAGGTGACA....................... | 28 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGACAAGACCAAGGTGACATATTTGAAG.............. | 28 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTCCCTTTGCAGCGGCTGATTGACAAG................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ACAAGACCAAGGTGACATATTTGAAGT............. | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TAAGATGTGGCCTGTCAGGAGTACTCACC.................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TGTTCCCTTTGCAGCGGCTGATTGACA..................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTGCAGCGGCTGATTGACAAGACCAAG............................. | 27 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TGGAGCTCTTCACTGGCAGCCCTTCCC.......................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................ACATATTTGAAGTGGCTGCCTGAGTC | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 |
| ............................................................................................................................................................................................................TGATTGACAAGACCAAGGTGACATATTTa................. | 29 | a | 2.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGACATATTTGAAGTGGCTGCCTGAGTC | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TAAGTGGGTGGAGGATAATGGAGGC......................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AAGACCAAGGTGACATA..................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTGCAGCGGCTGATTGACAAGACCAAt............................. | 27 | t | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................TGTCTCAGTCAGTGGGAGAGCTGGta........................................................................................................................ | 26 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................GACAAGACCAAGGTGACATATTTGAA............... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................AAGTGGGTGGAGGATAATGGAGGCTC....................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TTGACAAGACCAAGGTGACATATTTGAAG.............. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TCTGTCTCAGTCAGTGGGAGAGCTG........................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TGCAGCGGCTGATTGACAAGACCAAG............................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CCAAGGTGACATATTTGAAGTGGCTGCCT..... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCCCTTTGCAGCGGCTGATTGACAAGA.................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........AAGACAGAGCCACAGTTAAGTGGGTGGcg..................................................................................................................................................................................................................... | 29 | cg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TTGACAAGACCAAGGTGACATATTTGAAGT............. | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TGTGGCCTGTCAGGAGTACTCACCACTT................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGATTGACAAGACCAAGGTGACATATTT.................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGACAAGACCAAGGTGACATATTTGA................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TGGTGTTCCCTTTGCAGCGGCTGATTGA....................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ACAAGACCAAGGTGACATATTTGAAG.............. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGATTGACAAGACCAAGGTGACAT...................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TGAAGACAGAGCCACAGTTAAGTGGGTG........................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GACCAAGGTGACATATTTGAAGTGGC.......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CCCCACCCTGGTGTTCCCTTTGCAGC................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................CACAGTTAAGTGGGTGGAGGATAATG.............................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTGCAGCGGCTGATTGACAAGACCAA.............................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AAGACCAAGGTGACATATTTGAAGTGGC.......... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGACAAGACCAAGGTGACATATTTGAAGTGGC.......... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................TAAGTGGGTGGAGGATAATGGAGGt......................................................................................................................................................................................................... | 25 | t | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................ACATATTTGAAGTGGCTGCCTGAG.. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................CCACCTGCCTTCTGTCTCAGTCAGTGGGA................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTCCCTTTGCAGCGGCTGATTGACAAGACC................................ | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TAAGTGGGTGGAGGATAATGGAGG.......................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................TCCCAGTATCCCTGTGCCACCTGCCTT................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TGGTGTTCCCTTTGCAGCGGCTGATga........................................ | 27 | ga | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGCAGTGAAGACAGAGCCACAGTTAAGTGGGTGGAGGATAATGGAGGCTCCATGGAGCTCTTCACTGGCAGCCCTTCCCAGTATCCCTGTGCCACCTGCCTTCTGTCTCAGTCAGTGGGAGAGCTGGGGTCCAGGATAAGATGTGGCCTGTCAGGAGTACTCACCACTTCCCAACCCCACCCTGGTGTTCCCTTTGCAGCGGCTGATTGACAAGACCAAGGTGACATATTTGAAGTGGCTGCCTGAGTC .......................................................(((..(((..(((((((.((.......(((.((((..((.((.((((((((.((.....)))))))).)).))))..)))))))......)).))))))))))..)))....................................................................................... ................................................49....................................................................................................................167................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................CCACCTGCCTTCTGTCTCAGTCAGT..................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................CACCTGCCTTCTGTCTCAGTCAGTGGGA................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |