| Gene: Npas1 | ID: uc009fhv.1_intron_1_0_chr7_17044630_r.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(1) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| GGGAAGAGCACTGGGGAGCATCACGTGCTGTGGGTCAGTCACGTGCTCAGGTGAGAGGTGGCCCATTGCCATCCCAGCATCTCCAGCAGCTGCTCCCCATCCCAGCCAGGGCCCTTAAGGGAGGGCTGGCTCTGTAGACACAAAGGGGAAAGAACCTAGGAGGCCTAGGTATGGAATGGCCTCACTTGGTGGACACGGAGAGGAATCAGTGTTGGGAGGAGACACATCTGTGACGTAGGCAGGGCAGGAA .................................................................................................................................((((((...(((..(((........)))..((((((............)))))).....)))...)))))).................................................. .................................................................................................................................130...................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................TGGAATGGCCTCACTTGGTGGACACGG.................................................... | 27 | 1 | 40.00 | 40.00 | - | - | 5.00 | 2.00 | 14.00 | 11.00 | 3.00 | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TGGAATGGCCTCACTTGGTGGACACGGA................................................... | 28 | 1 | 38.00 | 38.00 | 21.00 | 4.00 | 6.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................CACATCTGTGACGTAGGCAGGGCAGG.. | 26 | 1 | 21.00 | 21.00 | 17.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAA | 22 | 1 | 18.00 | 18.00 | 14.00 | - | - | - | - | - | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAcgca | 26 | cgca | 13.00 | 18.00 | 9.00 | - | 1.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGA. | 21 | 1 | 11.00 | 11.00 | - | 4.00 | - | - | 2.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGGGAGGAGACACATCTGTGACGTAGGC.......... | 28 | 1 | 9.00 | 9.00 | - | 4.00 | 1.00 | - | - | - | - | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................TCTGTGACGTAGGCAGGGCAGGAA | 24 | 1 | 8.00 | 8.00 | 7.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GGAGACACATCTGTGACGTAGGCAGGG...... | 27 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAcga | 25 | cga | 6.00 | 18.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................CATCTGTGACGTAGGCAGGGCAGG.. | 24 | 1 | 5.00 | 5.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TAGGTATGGAATGGCCTCACTTGGTGGA......................................................... | 28 | 1 | 5.00 | 5.00 | - | 3.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................AGGGAGGGCTGGCTCTGTAGACACAAAG......................................................................................................... | 28 | 1 | 5.00 | 5.00 | 3.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TGGAATGGCCTCACTTGGTGGACACG..................................................... | 26 | 1 | 4.00 | 4.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................TAAGGGAGGGCTGGCTCTGTAGAC............................................................................................................... | 24 | 1 | 4.00 | 4.00 | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TAGGTATGGAATGGCCTCACTTGGTG........................................................... | 26 | 1 | 4.00 | 4.00 | - | - | - | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GGAGACACATCTGTGACGTAGGCAGG....... | 26 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................TCTGTGACGTAGGCAGGGCAGGA. | 23 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGGCTCTGTAGACACAAAGGGGAAAGA................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................TTAAGGGAGGGCTGGCTCTGTAGAC............................................................................................................... | 25 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAa | 23 | a | 3.00 | 18.00 | - | - | 1.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TCAGTGTTGGGAGGAGACACAT....................... | 22 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCA.... | 18 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGGGAGGAGACACATCTGTGACGTAG............ | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TCAGTGTTGGGAGGAGACACATCTGT................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGGCTCTGTAGACACAAAGGGGAAAG.................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TAGGTATGGAATGGCCTCACTTGGTGGAC........................................................ | 29 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TAGGTATGGAATGGCCTCACTTGGT............................................................ | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................................................................TAAGGGAGGGCTGGCTCTGTAGACA.............................................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAagc | 25 | agc | 2.00 | 18.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................TAGACACAAAGGGGAAAGAACCTAGGAGGC...................................................................................... | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TGGACACGGAGAGGAATCAGTGTTGGG.................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................GTAGACACAAAGGGGAAAGAACCTAGGA......................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TATGGAATGGCCTCACTTGGTGGA......................................................... | 24 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGTAGACACAAAGGGGAAAGAACCTA............................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................CATCTGTGACGTAGGCAGGGCAGGA. | 25 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGG...... | 16 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGAGGAATCAGTGTTGGGAGGAGAC........................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAcact | 26 | cact | 1.00 | 18.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TAAGGGAGGGCTGGCTCTGTAGA................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................GAGACACATCTGTGACGTAGGCAGG....... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AGTGTTGGGAGGAGACACATCTGTGACG............... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGGGAGGAGACACATCTGTGACGTAGG........... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GGAGACACATCTGTGACGTAGGCAG........ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GACACAAAGGGGAAAGAACCTAGGAGGCC..................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TCACTTGGTGGACACGGAGAGGAAT............................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TGGACACGGAGAGGAATCAGTGTTGGGA................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TCACTTGGTGGACACGGAGAGGAATC........................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAcaa | 25 | caa | 1.00 | 18.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................AAGGGGAAAGAACCTAGGAGG....................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TGGCCTCACTTGGTGGACACGGAGAG................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAcgt | 25 | cgt | 1.00 | 18.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TTGGGAGGAGACACATCTGTGACGTAG............ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAcgtt | 26 | cgtt | 1.00 | 18.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................TGTAGACACAAAGGGGAAAGAAC............................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TTGGGAGGAGACACATCTGTGACGTAGGC.......... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGt..... | 17 | t | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TCAGTGTTGGGAGGAGACACATCTG.................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................CTAGGTATGGAATGGCCTCACTTGGT............................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TATGGAATGGCCTCACTTGGTGGAC........................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TGGAATGGCCTCACTTGGTGGACACGGt................................................... | 28 | t | 1.00 | 40.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TAGACACAAAGGGGAAAGAACCTAGGAGGa...................................................................................... | 30 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TCACTTGGTGGACACGGAGAGGAATCA.......................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGG.. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................AGACACATCTGTGACGTAGGCAGGGC..... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................GAGACACATCTGTGACGTAGGCAGGGC..... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAtgct | 26 | tgct | 1.00 | 18.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGTAGACACAAAGGGGAAAGAAtcta............................................................................................ | 26 | tcta | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGAGGAATCAGTGTTGGGAGGAGACACttc...................... | 30 | ttc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGTAGACACAAAGGGGAAAGAACCTAGG.......................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................GAGACACATCTGTGACGTAGGCAGGG...... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGGCTCTGTAGACACAAAGGGGAA.................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................TGGCCTCACTTGGTGGACACGGAGAGG............................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................AGGGAGGGCTGGCTCTGTAGACACAAA.......................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAagct | 26 | agct | 1.00 | 18.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TGGCCTCACTTGGTGGACACGGAGA................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................CATCTGTGACGTAGGCAGGGCAGGAA | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................TCTGTGACGTAGGCAGGGCAG... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................GTAGACACAAAGGGGAAAGAACCTAGGAG........................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................CAAAGGGGAAAGAACCTAGGAGGC...................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................TGCCATCCCAGCATCTCCAGCAGCTGCTC........................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TGGTGGACACGGAGAGGAATCAGTGT...................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AGTGTTGGGAGGAGACACATCTGTGACGT.............. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................AGGAGACACATCTGTGACGTAGGCAG........ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................CGGAGAGGAATCAGTGTTGGGAGGAGACA.......................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............GGAGCATCACGTGCTGTGGGTCAGTC.................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGTAGACACAAAGGGGAAAGAACCTAGGA......................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................ACATCTGTGACGTAGGCAGG....... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TTAAGGGAGGGCTGGCTCTGTAGA................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TGGCCTCACTTGGTGGACACGGAGAGa............................................... | 27 | a | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TAAGGGAGGGCTGGCTCTGTAGACAC............................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGTGACGTAGGCAGGGCAGGAAaa | 24 | aa | 1.00 | 18.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TAAGGGAGGGCTGGCTCTGTAGACACA............................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................GACACATCTGTGACGTAGGCAGGGC..... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGAGGAATCAGTGTTGGGAGGAGACACA........................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GGAGGAGACACATCTGTGACGTAGGCA......... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TGGACACGGAGAGGAATCAGTGTT..................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GGAGACACATCTGTGACGTAGGCAGGGC..... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGGAAGAGCACTGGGGAGCATCACGTGCTGTGGGTCAGTCACGTGCTCAGGTGAGAGGTGGCCCATTGCCATCCCAGCATCTCCAGCAGCTGCTCCCCATCCCAGCCAGGGCCCTTAAGGGAGGGCTGGCTCTGTAGACACAAAGGGGAAAGAACCTAGGAGGCCTAGGTATGGAATGGCCTCACTTGGTGGACACGGAGAGGAATCAGTGTTGGGAGGAGACACATCTGTGACGTAGGCAGGGCAGGAA .................................................................................................................................((((((...(((..(((........)))..((((((............)))))).....)))...)))))).................................................. .................................................................................................................................130...................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................CACTTGGTGGACACGGAG.................................................. | 18 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................GCTCCCCATCCCAGCCAGGGCCCTTA..................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................CACTTGGTGGACACGGAGAGGAATCA.......................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..........................................................TGGCCCATTGCCATCCCAGCATCTCCA..................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................CCATTGCCATCCCAGCATCTCCA..................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................ATTGCCATCCCAGCATCTCCAGCAGC................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGCTGTGGGTCAGTCACGTGCTCA......................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................GTGCTGTGGGTCAGTCACGTGCTCA......................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................GCCCATTGCCATCCCAGCATCTCCAGCA.................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GGAGGAGACACATCTGTGACGTAGGCA......... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| GAAGAGCACTGGgggc............................................................................................................................................................................................................................................ | 16 | gggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................CCCATTGCCATCCCAGCATCTCCA..................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |