(4)
OTHER.mut
(1)
OVARY
(6)
PIWI.ip
(3)
PIWI.mut
(22)
TESTES

Sense strand
ACGTGGCTAGGAAGGTTAGAGAACGAGGAGGCTTTGTAAAGAGTGGGAAAATTTTAAAGGGTAGTGGTTGCAGCTCGGTGGTGGGGGTGGCTTAGCACTTTGAGAGTCTACCTGGGCCAACTGCTTCTGAGCCAAGAGAGCCGAGGGAAGGGATGGCCAATGGAGAGGTGACTCTTACTGGTGTCTCTTTTGTACTCCAGAGAAAGCCCCAAGCCACCTCCGGACCTTCCGTCATGGAAGACTCCTCGCT


Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
.......TAGGAAGGTTAGAGAACGAGGAGGCTT........................................................................................................................................................................................................................ 27 1 9.00 9.00 1.00 - - 1.00 - 1.00 1.00 - 1.00 - - 2.00 - - - 1.00 - - - - - 1.00 -
.......TAGGAAGGTTAGAGAACGAGGAGGC.......................................................................................................................................................................................................................... 25 1 7.00 7.00 1.00 2.00 - - - - - 2.00 - - - - 2.00 - - - - - - - - - -
.......TAGGAAGGTTAGAGAACGAGGAGGCT......................................................................................................................................................................................................................... 26 1 5.00 5.00 2.00 - - - - - 1.00 - - - - - 1.00 - - 1.00 - - - - - - -
..GTGGCTAGGAAGGTTAGAGAACGAGGAGGC.......................................................................................................................................................................................................................... 30 1 4.00 4.00 - 4.00 - - - - - - - - - - - - - - - - - - - - -
................TAGAGAACGAGGAGGCTTTGTAAAGA................................................................................................................................................................................................................ 26 1 3.00 3.00 - 2.00 - - - - - - 1.00 - - - - - - - - - - - - - -
............................................................................................TAGCACTTTGAGAGTCTACCTGGGCCA................................................................................................................................... 27 1 2.00 2.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................................TTCTGAGCCAAGAGAGCCG........................................................................................................... 19 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - -
..................................TGTAAAGAGTGGGAAAATTTTAAAGGG............................................................................................................................................................................................. 27 1 2.00 2.00 - - - - - - - - - - 1.00 - - - - - 1.00 - - - - - -
...............................................................................................................................TGAGCCAAGAGAGCCGAGGGAAGGGA................................................................................................. 26 1 2.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - -
..................GAGAACGAGGAGGCTTTGTAAAGAGT.............................................................................................................................................................................................................. 26 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - -
...............................................................................................................................TGAGCCAAGAGAGCCGAGGGAAG.................................................................................................... 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................TAAAGAGTGGGAAAATTTTAAAGGGT............................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00
........AGGAAGGTTAGAGAACGAGGAGGCT......................................................................................................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
......CTAGGAAGGTTAGAGAACGAGGAGGCTT........................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - -
.CGTGGCTAGGAAGGTTAGAGAA................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - -
..................................................................................................TTTGAGAGTCTACCTGGGCCAACTGCTTC........................................................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......TAGGAAGGTTAGAGAACGAGGAGGattt....................................................................................................................................................................................................................... 28 attt 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................TGCTTCTGAGCCAAGAGAGCCGAGGGc...................................................................................................... 27 c 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - -
............................................................................................TAGCACTTTGAGAGTCTACCTGGGCCAA.................................................................................................................................. 28 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
........AGGAAGGTTAGAGAACGAGGAGGCTT........................................................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................AAGCCCCAAGCCACCTCCGGACCTTCCGTC................. 30 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
.............................................................................................................................TCTGAGCCAAGAGAGCCGAGGGAAGGGA................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - -
..................................................................................................................................................................................................................................TTCCGTCATGGAAGACTCCTCGC. 23 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
............................................................................................................................TTCTGAGCCAAGAGAGCCGAGGGAAG.................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................................................TAGCACTTTGAGAGTCTACCTGGGC..................................................................................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................ATGGAGAGGTGACTCTTACTGGTGcc................................................................. 26 cc 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - -
.............................................................................................AGCACTTTGAGAGTCTACCTGGGCCAACTGa.............................................................................................................................. 31 a 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................GAGAACGAGGAGGCTTTGTAAAGAG............................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - -
....................................................................................................TGAGAGTCTACCTGGGCCAACTGg.............................................................................................................................. 24 g 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - -
........AGGAAGGTTAGAGAACGAGGAGGata........................................................................................................................................................................................................................ 26 ata 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................TTTGAGAGTCTACCTGGGCCAAC................................................................................................................................. 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....GCTAGGAAGGTTAGAGAACGAG............................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - -
...............................................................................................................................TGAGCCAAGAGAGCCGAGGGAAGGGAT................................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
........AGGAAGGTTAGAGAACGAGGAGGCTTTG...................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
.........................................................................................................................................................TGGCCAATGGAGAGGTGACTCTTACT....................................................................... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
............................................................................................................................TTCTGAGCCAAGAGAGCCGAGGGAA..................................................................................................... 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................CCAACTGCTTCTGAGCCAAGAGAGCCGAG......................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - -
..................................................................................................TTTGAGAGTCTACCTGGGCCAACTGCTT............................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - -
......................................................................................................................AACTGCTTCTGAGCCAAGAGAGCCGA.......................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - -
.......TAGGAAGGTTAGAGAACGAGGAGGCTTT....................................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
........AGGAAGGTTAGAGAACGAGGAGGCTa........................................................................................................................................................................................................................ 26 a 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACTGCTTCTGAGCCAAGAGAGCCGAGG........................................................................................................ 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -

Antisense strand
ACGTGGCTAGGAAGGTTAGAGAACGAGGAGGCTTTGTAAAGAGTGGGAAAATTTTAAAGGGTAGTGGTTGCAGCTCGGTGGTGGGGGTGGCTTAGCACTTTGAGAGTCTACCTGGGCCAACTGCTTCTGAGCCAAGAGAGCCGAGGGAAGGGATGGCCAATGGAGAGGTGACTCTTACTGGTGTCTCTTTTGTACTCCAGAGAAAGCCCCAAGCCACCTCCGGACCTTCCGTCATGGAAGACTCCTCGCT


Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
.......................GGAGGCTTTGTAAAGAccg................................................................................................................................................................................................................ 19 ccg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - -
...................................................................................................................................................................................................................AGCCACCTCCGGACCTTCCGTCATGGAAGA......... 30 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -