| Gene: Ppp1r12c | ID: uc009exq.1_intron_12_0_chr7_4436374_r | SPECIES: mm9 |
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(2) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| CCCTCAATGGTGTGTCTTCCCCTGTGTCCTCCAACCCTAAGAGCCCTGTGGTGAGTCTGATTGCTGATGTGAGGCTGGGGCAGTGGCGGCACACTGTAAATACTCCCACCTCTGGTCAGGAAGGTGGCCTTTTGACTTGCTTCCTAGGTCCTTGTGGACAAAGAGTTATTTTTTGGTGGCACCCACCCTGGCTGTGATGTCCTGTGATTCTCCTGGAGTTATACTCTTAGCTTCTGTGGAGAGGGATCATTGCTTTGCTCAGTGATGGAGACCTTCTCTCTTCTCCCAGCTGCCAGAAGAGGCTCCCTTTTCCAGGCGCTTTGGTCTCCAGAAGACAGG ..................................................(((((((......(((((..((((.((((((((((......)))))).......))))))))..))))).((((...))))..)))))))...((..((((....))))..)).((((((....))))))............................................................................................................................................................... ..................................................51...................................................................................................................................184......................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGTCTGATTGCTGATGTGAGGC........................................................................................................................................................................................................................................................................ | 25 | 1 | 15.00 | 15.00 | 5.00 | 1.00 | - | 3.00 | 4.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - |
| ..................................................GTGAGTCTGATTGCTGATGTGAGGCTG...................................................................................................................................................................................................................................................................... | 27 | 1 | 9.00 | 9.00 | - | 3.00 | 2.00 | - | - | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTCTGATTGCTGATGTGAGGCT....................................................................................................................................................................................................................................................................... | 26 | 1 | 5.00 | 5.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................TGAGTCTGATTGCTGATGTGAGGCTG...................................................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTCTGATTGCTGATGTGAGGCTt...................................................................................................................................................................................................................................................................... | 27 | t | 3.00 | 5.00 | - | - | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................GAGTTATTTTTTGGTtcg............................................................................................................................................................... | 18 | tcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................GTGAGTCTGATTGCTGATGTGAGGCTGGGG................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................CCCTGTGTCCTCCAACCCTAAGAGCCC..................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...TCAATGGTGTGTCTTCCCCTGTGTCCTC.................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TGTGGACAAAGAGTTATTTTTTGGTGGC............................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTCTGATTGCTGATGTGAGG......................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....CAATGGTGTGTCTTCCCCTGTGTCCTCt................................................................................................................................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................TTTTCCAGGCGCTTTata.............. | 18 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................................................................................GCTTCTGTGGAGAGGGATCATTGCTT.................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CCCTCAATGGTGTGTCTTCCCCTGTGTCCTCCAACCCTAAGAGCCCTGTGGTGAGTCTGATTGCTGATGTGAGGCTGGGGCAGTGGCGGCACACTGTAAATACTCCCACCTCTGGTCAGGAAGGTGGCCTTTTGACTTGCTTCCTAGGTCCTTGTGGACAAAGAGTTATTTTTTGGTGGCACCCACCCTGGCTGTGATGTCCTGTGATTCTCCTGGAGTTATACTCTTAGCTTCTGTGGAGAGGGATCATTGCTTTGCTCAGTGATGGAGACCTTCTCTCTTCTCCCAGCTGCCAGAAGAGGCTCCCTTTTCCAGGCGCTTTGGTCTCCAGAAGACAGG ..................................................(((((((......(((((..((((.((((((((((......)))))).......))))))))..))))).((((...))))..)))))))...((..((((....))))..)).((((((....))))))............................................................................................................................................................... ..................................................51...................................................................................................................................184......................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............CTTCCCCTGTGTCCTCCAACCCTA............................................................................................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................CTGGCTGTGATGTCCcat......................................................................................................................................... | 18 | cat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |