| Gene: Cnot3 | ID: uc009evl.1_intron_14_0_chr7_3609994_f | SPECIES: mm9 |
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(3) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| GAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGTGAGGGGCTGGAGAAAGGGCTGGGGACCGGGACTCCCCAGTCTGAGGGAGGAGCTGGTTCCTGGGTCCTGAGAGACTAGGTAGAGTACTCGTCTCAAAGTGCTGAGGACTTGACTTGGGGCTCCCTAAAGCAGGTTGAAGTGTGCTTCTGAACACTCTCCTGAAGGCAGGGCTGGAGCTCAGAGCCTCCTGGCACTAAATCCTCACTGGTCCACAGGCAGTACCTCCCCCGGAACCCTTGCCCGACACCCCCCTACCACCACCAGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................CACCCCTCTGACTCCGAGCGCATTCGGca........................................................................................................................................................................................................................................................................ | 29 | ca | 6.00 | 0.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................ACCCCTCTGACTCCGAGCGCATTCGGca........................................................................................................................................................................................................................................................................ | 28 | ca | 5.00 | 0.00 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................CCACCCCTCTGACTCCGAGCGCATTCGGc......................................................................................................................................................................................................................................................................... | 29 | c | 5.00 | 0.00 | - | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGGCTGGAGAAAGGGCTGG................................................................................................................................................................................................................................................... | 24 | 1 | 4.00 | 4.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................TTCTGAACACTCTCCTGAAGGCAGGGCT............................................................................................. | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGGCTGGAGAAAGGGCTGGG.................................................................................................................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................CCCACCCCTCTGACTCCGAGCGCATTC............................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AAAGTGCTGAGGACTTGACTTGGGGC................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAAAGTGCTGAGGACTTGACTTGGGGg................................................................................................................................................. | 27 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............CACATGCCCCACCCCTCTGACTCCGAGCGC................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................CCCACCCCTCTGACTCCGAGCGCATTCGGTt........................................................................................................................................................................................................................................................................ | 31 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TGCTTCTGAACACTCTCCTGAAGGCAGGGC.............................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................TGAGGGGCTGGAGAAAGGGCTGGGGA................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................GGACTTGACTTGGGGCTCCCTAAAGCA...................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CACCCCTCTGACTCCGAGCGCATTCGGc......................................................................................................................................................................................................................................................................... | 28 | c | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TGTGCTTCTGAACACTCTCCTGAAGGCAGGG............................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TGCTTCTGAACACTCTCCTGAAGGCA.................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................AGTACCTCCCCCGGAACCCTTGCCCGca.................... | 28 | ca | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................CAGTCTGAGGGAGGAGCTGG................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................TGACTCCGAGCGCATTCGGcagt...................................................................................................................................................................................................................................................................... | 23 | cagt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................CCCACCCCTCTGACTCCGAGCGCATTCGGc......................................................................................................................................................................................................................................................................... | 30 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAAAGTGCTGAGGACTTGACTTGGGGC................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TAAAGCAGGTTGAAGTGTGCTTCTGAACACTC............................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................CCTCTGACTCCGAGCGCATTCGGca........................................................................................................................................................................................................................................................................ | 25 | ca | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................AGTACCTCCCCCGGAACCCTTGCCCGAC.................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................TTCTGAACACTCTCCTGAAGGCAGGGC.............................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAAAGTGCTGAGGACTTGACTTGGG................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................GTGCTTCTGAACACTCTCCTGAAGGC................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGTGAGGGGCTGGAGAAAGGGCTGGGGACCGGGACTCCCCAGTCTGAGGGAGGAGCTGGTTCCTGGGTCCTGAGAGACTAGGTAGAGTACTCGTCTCAAAGTGCTGAGGACTTGACTTGGGGCTCCCTAAAGCAGGTTGAAGTGTGCTTCTGAACACTCTCCTGAAGGCAGGGCTGGAGCTCAGAGCCTCCTGGCACTAAATCCTCACTGGTCCACAGGCAGTACCTCCCCCGGAACCCTTGCCCGACACCCCCCTACCACCACCAGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................CTCCCCAGTCTGAGagt............................................................................................................................................................................................................................ | 17 | agt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................................................................................GGCAGGGCTGGAGCTCAGAgggg................................................................................... | 23 | gggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |