| Gene: AK014378 | ID: uc009eux.1_intron_0_0_chr7_3423248_r.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| CCTGAGCAGTCCAGGCTGGAAGCTCCCTAGTTGGCTTGCAGGATTCTGAGGTCCAGAGGCTTGGAAGAAGTACTGGGGGTGGGGGCGGGGTGGACTCTTTGAGTCTGAAGGTTTGGAGGAGGTGGGCTTGGTCTGGATTCTTAAAGTCTGGGGGAGGAGAGGCAGGGTATGTAGTTTGAGGGTTTCAGGGAGAAGGGTTGAACTCATATGTATGTGGGAACAGAGCTTCAGTATAGGCTCCTGGTCTTGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR037900(GSM510436) testes_rep1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................TTTGAGTCTGAAGGTTTGGAGGAGG................................................................................................................................ | 25 | 1 | 12.00 | 12.00 | 2.00 | 6.00 | - | 1.00 | - | - | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - |
| ...........................TAGTTGGCTTGCAGGATTCTGAGGT...................................................................................................................................................................................................... | 25 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................TAGTTGGCTTGCAGGATTCTGAGGTC..................................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................TGAGGTCCAGAGGCTTGGAAGAAGT................................................................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................TAGTTGGCTTGCAGGATTCTGAGG....................................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGGATTCTTAAAGTCTGGGGGAGGA............................................................................................ | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .................................................................................................TTTGAGTCTGAAGGTTTGGAGGAG................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TTTGAGTCTGAAGGTTTGGAGGAGGTG.............................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TTTGAGTCTGAAGGTTTGGAGGAGGT............................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TTTGAGTCTGAAGGTTTGGAGtagg................................................................................................................................ | 25 | tagg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................TGAGGTCCAGAGGCTTGGAAGAAG.................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGGGCTTGGTCTGGAaca.............................................................................................................. | 18 | aca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................TGGATTCTTAAAGTCTGGGGGAGGAG........................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................TGGATTCTTAAAGTCTGGGGGAGGAa........................................................................................... | 26 | a | 1.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TGCAGGATTCTGAGGTCCAGAGGCTT............................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TTAAAGTCTGGGGGAGGAGAGGC....................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGTGGGAACAGAGCTTCAGTATAGG............. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................GTGGGGGCGGGGTGGAaatt........................................................................................................................................................ | 20 | aatt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................................................................GTGGGCTTGGTCTGGATTCTTAAAG........................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................TGGCTTGCAGGATTCTGAGGTCCAGA................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| CCTGAGCAGTCCAGGCTGGAAGCTCCCTAGTTGGCTTGCAGGATTCTGAGGTCCAGAGGCTTGGAAGAAGTACTGGGGGTGGGGGCGGGGTGGACTCTTTGAGTCTGAAGGTTTGGAGGAGGTGGGCTTGGTCTGGATTCTTAAAGTCTGGGGGAGGAGAGGCAGGGTATGTAGTTTGAGGGTTTCAGGGAGAAGGGTTGAACTCATATGTATGTGGGAACAGAGCTTCAGTATAGGCTCCTGGTCTTGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR037900(GSM510436) testes_rep1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................GAGGAGGTGGGCTTGGTCTGGATTCTTA........................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| CTGAGCAGTCCAGGCTctct......................................................................................................................................................................................................................................... | 20 | ctct | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |