| Gene: Plekha5 | ID: uc009eob.1_intron_21_0_chr6_140525860_f.5p | SPECIES: mm9 |
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(3) PIWI.ip |
(1) PIWI.mut |
(10) TESTES |
| CATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAACAGGTGGGTCAGCTCTGCACAGCGGTGTCTAAATGGAAAGATGGCGTTACATTTGCACCTCAATAGAGTCTATCACCAGAAACCAGCCCTCTGAGCCACTGAATGGTACATAACTTAATAAACCAAAAGCAGCAATTCTGGCAGCCACCGCCACACAAACCCTGACCTGAGTGAGTGAAGCTGAAGGGACTTCAGCGACTCTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................AGCTCTGCACAGCGGTGTCTAAATGGAAAGATGGCGTTACATTTGCACCTCA............................................................................................................................................. | 52 | 1 | 25.00 | 25.00 | 25.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGACCTGAGTGAGTGAAGCTGAAGGGA.............. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ..................................................GTGGGTCAGCTCTGCACAGCGGTGT............................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............CAAACACAAACAGCAAAGAGGCTCTTCA............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................GGGTCAGCTCTGCACAGCGG.................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| .............AGCAAACACAAACAGCAAAGAGGCTCTTCA............................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................ACAGCAAAGAGGCTCTTCAGAAACAGGT...................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................GTGGGTCAGCTCTGCACAGCGGTGTC.............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................ATCACCAGAAACCAagcc.................................................................................................................. | 18 | agcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| .............AGCAAACACAAACAGCAAAGAGGCTCTTC................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .................AACACAAACAGCAAAGAGGCTCTTCAG.............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| CATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAACAGGTGGGTCAGCTCTGCACAGCGGTGTCTAAATGGAAAGATGGCGTTACATTTGCACCTCAATAGAGTCTATCACCAGAAACCAGCCCTCTGAGCCACTGAATGGTACATAACTTAATAAACCAAAAGCAGCAATTCTGGCAGCCACCGCCACACAAACCCTGACCTGAGTGAGTGAAGCTGAAGGGACTTCAGCGACTCTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................AGGCTCTTCAGAAAgctc........................................................................................................................................................................................................... | 18 | gctc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................AGGCTCTTCAGAAAgcta........................................................................................................................................................................................................... | 18 | gcta | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |